#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 2HS1HS3HS4HS1
FINGERPRINT = 32:64:74:82:104:106:113:120:124:170
LOOP_LENGTH_SUM = 9
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  105
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  105
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  107
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  107
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = GGACGG
S1_SQLEN2 = 6
S1_SQ = GCGGACGGGU
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 62
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 62
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 60
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 60
S2_SQ2 = CAA
S2_SQLEN2 = 3
S2_SQ = UGCAAGU
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AG
S3_SQLEN2 = 2
S3_SQ = ACAGGG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 341
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 341
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 339
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 339
S4_SQ2 = CAC
S4_SQLEN2 = 3
S4_SQ = CCCACUC
S4_SQLEN = 7
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  348
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  348
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  350
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  350
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GGCAG
S5_SQLEN2 = 5
S5_SQ = GAGGCAGCA
S5_SQLEN = 9
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 107
H1_OUTID2_ORIG = 60
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 192.44185809182088
H1_P_Y = 118.9802172196895
H1_P_Z = 39.40772758152146
# Orientation:
H1_DX_X = -0.5048486030138122
H1_DX_Y = 0.7871093565534153
H1_DX_Z = 0.3543822073144369
H1_DY_X = -0.05199227633573855
H1_DY_Y = 0.38206851586129176
H1_DY_Z = -0.9226702836815335
H1_DZ_X = -0.8616406972958259
H1_DZ_Y = -0.4842339414101531
H1_DZ_Z = -0.15196314931577604
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 209.4514544938775
H2_P_Y = 140.1336997444426
H2_P_Z = 56.56616338319338
# Orientation:
H2_DX_X = 0.010015936652735036
H2_DX_Y = -0.6957861201080675
H2_DX_Z = 0.7181791949631346
H2_DY_X = 0.9909017478216526
H2_DY_Y = -0.0894931609937828
H2_DY_Z = -0.1005221383543784
H2_DZ_X = 0.1342140349477745
H2_DZ_Y = 0.7126518429080875
H2_DZ_Z = 0.6885593246937844
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 214.9710372037541
H3_P_Y = 120.55269802476374
H3_P_Z = 50.55964431522421
# Orientation:
H3_DX_X = 0.8698248928478165
H3_DX_Y = 0.31620663840296004
H3_DX_Z = 0.37870571373059647
H3_DY_X = 0.49309578839975643
H3_DY_Y = -0.5320470334296346
H3_DY_Z = -0.688318601870634
H3_DZ_X = -0.016161659714526877
H3_DZ_Y = 0.7854548466007572
H3_DZ_Z = -0.6187079155034709
## Properties of helix 4
H4_INID = 1
H4_OUTID = 7
H4_INID2 = 3
H4_OUTID2 = 5
H4_INID2_ORIG = 350
H4_OUTID2_ORIG = 339
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 214.55727390851357
H4_P_Y = 102.03280715036189
H4_P_Z = 60.197161053094696
# Orientation:
H4_DX_X = -0.7150010263131321
H4_DX_Y = 0.4616312167264738
H4_DX_Z = 0.5250430002531274
H4_DY_X = -0.6855338372790243
H4_DY_Y = -0.31558450841427543
H4_DY_Z = -0.6560867137767943
H4_DZ_X = -0.13717467082761914
H4_DZ_Y = -0.829037416400837
H4_DZ_Z = 0.5421070668150065
## Properties of helix 5
H5_INID = 1
H5_OUTID = 9
H5_INID2 = 3
H5_OUTID2 = 7
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 202.57771480244062
H5_P_Y = 122.65861223722848
H5_P_Z = 66.6538877068656
# Orientation:
H5_DX_X = -0.782982722580698
H5_DX_Y = 0.6162559683159259
H5_DX_Z = 0.08465599597859352
H5_DY_X = -0.5533664153428788
H5_DY_Y = -0.7522173466030893
H5_DY_Z = 0.35770752555681895
H5_DZ_X = 0.28411910620496883
H5_DZ_Y = 0.23323302721613004
H5_DZ_Z = 0.9299885421363427
#############  END of Description of junction: j1