############# Start of Description of junction: j17 # Number of strands: NUM_STRANDS = 5 LILLEY = HS2HS2HS8HS2HS4 FINGERPRINT = 64:77:87:88:94:101:115:123:145:163 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 667 S1_NAME_ID3 = 672 S1_NUM_ID5_ORIG = 667 S1_NUM_ID3_ORIG = 672 S1_NAME2_ID5 = 668 S1_NAME2_ID3 = 671 S1_NUM2_ID5_ORIG = 668 S1_NUM2_ID3_ORIG = 671 S1_SQ2 = GGAC S1_SQLEN2 = 4 S1_SQ = UGGACC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 583 S2_NAME_ID3 = 590 S2_NUM_ID5_ORIG = 583 S2_NUM_ID3_ORIG = 590 S2_NAME2_ID5 = 584 S2_NAME2_ID3 = 589 S2_NUM2_ID5_ORIG = 584 S2_NUM2_ID3_ORIG = 589 S2_SQ2 = CGACUC S2_SQLEN2 = 6 S2_SQ = GCGACUCA S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 808 S3_NAME_ID3 = 813 S3_NUM_ID5_ORIG = 808 S3_NUM_ID3_ORIG = 813 S3_NAME2_ID5 = 809 S3_NAME2_ID3 = 812 S3_NUM2_ID5_ORIG = 809 S3_NUM2_ID3_ORIG = 812 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = GGUUCU S3_SQLEN = 6 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1194 S4_NAME_ID3 = 1199 S4_NUM_ID5_ORIG = 1194 S4_NUM_ID3_ORIG = 1199 S4_NAME2_ID5 = 1195 S4_NAME2_ID3 = 1198 S4_NUM2_ID5_ORIG = 1195 S4_NUM2_ID3_ORIG = 1198 S4_SQ2 = GCGU S4_SQLEN2 = 4 S4_SQ = AGCGUU S4_SQLEN = 6 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 1246 S5_NAME_ID3 = 1257 S5_NUM_ID5_ORIG = 1246 S5_NUM_ID3_ORIG = 1257 S5_NAME2_ID5 = 1247 S5_NAME2_ID3 = 1256 S5_NUM2_ID5_ORIG = 1247 S5_NUM2_ID3_ORIG = 1256 S5_SQ2 = AGUGCGAAUG S5_SQLEN2 = 10 S5_SQ = AAGUGCGAAUGC S5_SQLEN = 12 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 2 H1_OUTID2 = 7 H1_INID2_ORIG = 668 H1_OUTID2_ORIG = 589 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 331.1636654316989 H1_P_Y = 66.55339554397068 H1_P_Z = 100.52639044505702 # Orientation: H1_DX_X = 0.7609849233681416 H1_DX_Y = 0.14031745496764358 H1_DX_Z = -0.6334137338563437 H1_DY_X = 0.1913069311240747 H1_DY_Y = 0.8843855969310681 H1_DY_Z = 0.4257508356359949 H1_DZ_X = 0.6199222568276923 H1_DZ_Y = -0.4451664045862884 H1_DZ_Z = 0.6461604040154469 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 809 H2_OUTID2_ORIG = 671 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 313.6551432120985 H2_P_Y = 72.23259464706913 H2_P_Z = 95.69375987510062 # Orientation: H2_DX_X = 0.6545280982593908 H2_DX_Y = -0.4865761710817793 H2_DX_Z = -0.5786506703740173 H2_DY_X = -0.72071928626508 H2_DY_Y = -0.17036909991648486 H2_DY_Z = -0.6719658326129405 H2_DZ_X = 0.22837836805291545 H2_DZ_Y = 0.8568652166642181 H2_DZ_Z = -0.4621961937061769 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 6 H3_INID2 = 2 H3_OUTID2 = 5 H3_INID2_ORIG = 1195 H3_OUTID2_ORIG = 812 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 319.8537922991959 H3_P_Y = 49.33998415308877 H3_P_Z = 102.2794229239207 # Orientation: H3_DX_X = -0.4183478101026594 H3_DX_Y = -0.6157272745428131 H3_DX_Z = -0.6677312581917931 H3_DY_X = 0.3109428734069297 H3_DY_Y = -0.7878205442122805 H3_DY_Z = 0.531651502014725 H3_DZ_X = -0.8534047335583068 H3_DZ_Y = 0.01478896551987674 H3_DZ_Z = 0.5210390074064435 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1247 H4_OUTID2_ORIG = 1198 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 334.4329139853746 H4_P_Y = 43.77079265904835 H4_P_Z = 89.32934544255932 # Orientation: H4_DX_X = -0.4153784837342869 H4_DX_Y = 0.41998435964564607 H4_DX_Z = -0.8068914752949468 H4_DY_X = 0.6899905862143214 H4_DY_Y = 0.7235024714384153 H4_DY_Z = 0.021381411509096893 H4_DZ_X = 0.5927678349794405 H4_DZ_Y = -0.5478661437573535 H4_DZ_Z = -0.5903126140768364 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 12 H5_INID2 = 2 H5_OUTID2 = 11 H5_INID2_ORIG = 584 H5_OUTID2_ORIG = 1256 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 308.2243802282883 H5_P_Y = 58.9899250876691 H5_P_Z = 77.29306437744631 # Orientation: H5_DX_X = 0.4513310314325736 H5_DX_Y = 0.8906688808499794 H5_DX_Z = -0.05485658348311517 H5_DY_X = 0.7156577708690861 H5_DY_Y = -0.39799765685895494 H5_DY_Z = -0.5739615145020025 H5_DZ_X = -0.5330424514620518 H5_DZ_Y = 0.21978810208978672 H5_DZ_Z = -0.8170427988294904 ############# END of Description of junction: j17