############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 19:63:73:101:112:174 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 221.88059766263382 H1_P_Y = 149.75851477232283 H1_P_Z = 46.6451873987667 # Orientation: H1_DX_X = -0.6782289413181957 H1_DX_Y = 0.18668429536563735 H1_DX_Z = 0.7107422015205032 H1_DY_X = 0.2371225947036919 H1_DY_Y = 0.9710532625458939 H1_DY_Z = -0.02878257076702795 H1_DZ_X = -0.6955417875579997 H1_DZ_Y = 0.14901186249019815 H1_DZ_Z = -0.7028634907276157 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 239.95419930192102 H2_P_Y = 135.18221947599216 H2_P_Z = 33.98072231180511 # Orientation: H2_DX_X = 0.12857036702899904 H2_DX_Y = 0.9843720989684925 H2_DX_Z = 0.1203379885754643 H2_DY_X = 0.4538683127456409 H2_DY_Y = 0.04948325977684931 H2_DY_Z = -0.8896937460088665 H2_DZ_X = -0.8817444161475976 H2_DZ_Y = 0.16900585130170498 H2_DZ_Z = -0.4404132228014106 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 210.24804737540114 H3_P_Y = 147.26198802493593 H3_P_Z = 63.64204710693386 # Orientation: H3_DX_X = 0.6248886777618736 H3_DX_Y = 0.5035338197779708 H3_DX_Z = -0.596630398777009 H3_DY_X = -0.7799057092404382 H3_DY_Y = 0.4373777402173573 H3_DY_Z = -0.4477139679041713 H3_DZ_X = 0.03551373113532463 H3_DZ_Y = 0.7450868437317695 H3_DZ_Z = 0.6660212986074043 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 208.03294243152 H4_P_Y = 134.88924168889451 H4_P_Z = 51.865066435060406 # Orientation: H4_DX_X = 0.8695442799568411 H4_DX_Y = -0.41333225993210476 H4_DX_Z = 0.27027613304500875 H4_DY_X = -0.47176466248862425 H4_DY_Y = -0.5333623671544387 H4_DY_Z = 0.7021130169213592 H4_DZ_X = -0.1460508419056339 H4_DZ_Y = -0.738025086431918 H4_DZ_Z = -0.6587777496059033 ############# END of Description of junction: j4