############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS5 FINGERPRINT = 55 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2128 S1_NAME_ID3 = 2138 S1_NUM_ID5_ORIG = 2128 S1_NUM_ID3_ORIG = 2138 S1_NAME2_ID5 = 2130 S1_NAME2_ID3 = 2136 S1_NUM2_ID5_ORIG = 2130 S1_NUM2_ID3_ORIG = 2136 S1_SQ2 = UGUGAAC S1_SQLEN2 = 7 S1_SQ = CCUGUGAACCC S1_SQLEN = 11 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2153 S2_NAME_ID3 = 2160 S2_NUM_ID5_ORIG = 2153 S2_NUM_ID3_ORIG = 2160 S2_NAME2_ID5 = 2155 S2_NAME2_ID3 = 2158 S2_NUM2_ID5_ORIG = 2155 S2_NUM2_ID3_ORIG = 2158 S2_SQ2 = GGGA S2_SQLEN2 = 4 S2_SQ = GGGGGAGG S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 2130 H1_OUTID2_ORIG = 2158 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 350.51251084885473 H1_P_Y = 173.80146117132662 H1_P_Z = 156.2544859624901 # Orientation: H1_DX_X = -0.5592166821816136 H1_DX_Y = 0.473485538238549 H1_DX_Z = -0.680505802656171 H1_DY_X = -0.1329329662464147 H1_DY_Y = -0.8614465311417518 H1_DY_Z = -0.49014151065659917 H1_DZ_X = -0.8182942801063291 H1_DZ_Y = -0.1836336544938888 H1_DZ_Z = 0.5446771080948167 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 2155 H2_OUTID2_ORIG = 2136 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 339.83166892408855 H2_P_Y = 178.42905976575474 H2_P_Z = 137.23132809212123 # Orientation: H2_DX_X = -0.35491889437452073 H2_DX_Y = 0.9336139547036453 H2_DX_Z = -0.048964905785879864 H2_DY_X = 0.35964759006907343 H2_DY_Y = 0.0880029734299228 H2_DY_Z = -0.9289290003143549 H2_DZ_X = -0.8629520203194829 H2_DZ_Y = -0.34730456410784427 H2_DZ_Z = -0.36700592689544465 ############# END of Description of junction: j28