#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 2HS1HS3HS4HS1
FINGERPRINT = 36:62:73:81:106:108:115:119:126:170
LOOP_LENGTH_SUM = 9
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  105
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  105
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  107
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  107
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = GGACGG
S1_SQLEN2 = 6
S1_SQ = GCGGACGGGU
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 62
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 62
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 60
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 60
S2_SQ2 = CAA
S2_SQLEN2 = 3
S2_SQ = UGCAAGU
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AG
S3_SQLEN2 = 2
S3_SQ = ACAGGG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 341
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 341
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 339
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 339
S4_SQ2 = CAC
S4_SQLEN2 = 3
S4_SQ = CCCACUC
S4_SQLEN = 7
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  348
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  348
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  350
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  350
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GGCAG
S5_SQLEN2 = 5
S5_SQ = GAGGCAGCA
S5_SQLEN = 9
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 107
H1_OUTID2_ORIG = 60
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 192.04908038379511
H1_P_Y = 118.83329765111223
H1_P_Z = 39.17202397965832
# Orientation:
H1_DX_X = -0.5274229179656515
H1_DX_Y = 0.780961892253174
H1_DX_Z = 0.3345498295514986
H1_DY_X = -0.04923739881803613
H1_DY_Y = 0.36501369995676214
H1_DY_Z = -0.9296992402930755
H1_DZ_X = -0.848174949030124
H1_DZ_Y = -0.5068170495279389
H1_DZ_Z = -0.15406405857809347
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 208.85460760616496
H2_P_Y = 139.84550829919615
H2_P_Z = 56.034829963513324
# Orientation:
H2_DX_X = 0.012632684938552075
H2_DX_Y = -0.6708801733588245
H2_DX_Z = 0.7414581635300124
H2_DY_X = 0.9909581423699478
H2_DY_Y = -0.0906566165290883
H2_DY_Z = -0.09891075750496725
H2_DZ_X = 0.13357535454548497
H2_DZ_Y = 0.736003512813312
H2_DZ_Z = 0.6636689338702695
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 214.83823004273023
H3_P_Y = 120.41283764229738
H3_P_Z = 50.4073938526772
# Orientation:
H3_DX_X = 0.8595701337357866
H3_DX_Y = 0.3100215504346977
H3_DX_Z = 0.4062337054646079
H3_DY_X = 0.5108462441043287
H3_DY_Y = -0.5419009373695616
H3_DY_Z = -0.667367581593922
H3_DZ_X = 0.01324009342678778
H3_DZ_Y = 0.7811722040267881
H3_DZ_Z = -0.6241752058372612
## Properties of helix 4
H4_INID = 1
H4_OUTID = 7
H4_INID2 = 3
H4_OUTID2 = 5
H4_INID2_ORIG = 350
H4_OUTID2_ORIG = 339
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 214.1616654311144
H4_P_Y = 101.86159537565345
H4_P_Z = 60.26625835441475
# Orientation:
H4_DX_X = -0.7094037547244056
H4_DX_Y = 0.47954700223299085
H4_DX_Z = 0.5165084563027591
H4_DY_X = -0.6848706978489076
H4_DY_Y = -0.29597827659769393
H4_DY_Z = -0.6658445667047204
H4_DZ_X = -0.16642848317175662
H4_DZ_Y = -0.8260941425961192
H4_DZ_Z = 0.5383957908059145
## Properties of helix 5
H5_INID = 1
H5_OUTID = 9
H5_INID2 = 3
H5_OUTID2 = 7
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 202.0960185350298
H5_P_Y = 122.21048301995933
H5_P_Z = 66.5959163461026
# Orientation:
H5_DX_X = -0.7859292639454623
H5_DX_Y = 0.6115565901272788
H5_DX_Z = 0.09117965313626542
H5_DY_X = -0.5563197825298687
H5_DY_Y = -0.7637552824393197
H5_DY_Z = 0.32739298726757227
H5_DZ_X = 0.2698582806587524
H5_DZ_Y = 0.20658268470019436
H5_DZ_Z = 0.9404786561862863
#############  END of Description of junction: j1