############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS32HS4 FINGERPRINT = 26:35:123:149:157:176 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 171 S1_NAME_ID3 = 180 S1_NUM_ID5_ORIG = 171 S1_NUM_ID3_ORIG = 180 S1_NAME2_ID5 = 173 S1_NAME2_ID3 = 178 S1_NUM2_ID5_ORIG = 173 S1_NUM2_ID3_ORIG = 178 S1_SQ2 = CAUGUG S1_SQLEN2 = 6 S1_SQ = CCCAUGUGGA S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 136 S2_NAME_ID3 = 141 S2_NUM_ID5_ORIG = 136 S2_NUM_ID3_ORIG = 141 S2_NAME2_ID5 = 138 S2_NAME2_ID3 = 139 S2_NUM2_ID5_ORIG = 138 S2_NUM2_ID3_ORIG = 139 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = AGAGGG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 199 S3_NAME_ID3 = 207 S3_NUM_ID5_ORIG = 199 S3_NUM_ID3_ORIG = 207 S3_NAME2_ID5 = 201 S3_NAME2_ID3 = 205 S3_NUM2_ID5_ORIG = 201 S3_NUM2_ID3_ORIG = 205 S3_SQ2 = CAAAG S3_SQLEN2 = 5 S3_SQ = UCCAAAGGG S3_SQLEN = 9 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 213 S4_NAME_ID3 = 218 S4_NUM_ID5_ORIG = 213 S4_NUM_ID3_ORIG = 218 S4_NAME2_ID5 = 215 S4_NAME2_ID3 = 216 S4_NUM2_ID5_ORIG = 215 S4_NUM2_ID3_ORIG = 216 S4_SQ2 = CG S4_SQLEN2 = 2 S4_SQ = CCCGCU S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 173 H1_OUTID2_ORIG = 139 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 402.99945183335035 H1_P_Y = 92.01602328835946 H1_P_Z = 23.850570956284436 # Orientation: H1_DX_X = 0.7799563635895197 H1_DX_Y = -0.4771010841926966 H1_DX_Z = -0.4050217603516941 H1_DY_X = 0.15699442280276799 H1_DY_Y = 0.7756356625871348 H1_DY_Z = -0.6113444774689825 H1_DZ_X = 0.6058224344682799 H1_DZ_Y = 0.4132358580582718 H1_DZ_Z = 0.6798641801932135 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 201 H2_OUTID2_ORIG = 178 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 386.00689556915677 H2_P_Y = 81.45187397883993 H2_P_Z = 2.7326160485996773 # Orientation: H2_DX_X = -0.277254630620007 H2_DX_Y = 0.8567810385904409 H2_DX_Z = 0.43480584369536457 H2_DY_X = 0.6345500747442543 H2_DY_Y = 0.5030945473363744 H2_DY_Z = -0.5867214663556108 H2_DZ_X = -0.7214402764205943 H2_DZ_Y = 0.11323483718487637 H2_DZ_Z = -0.6831557649657087 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 215 H3_OUTID2_ORIG = 205 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 397.8886320080117 H3_P_Y = 82.20424774369904 H3_P_Z = 39.14951956370019 # Orientation: H3_DX_X = -0.14597196045565397 H3_DX_Y = 0.9121276442033803 H3_DX_Z = 0.3830343945923076 H3_DY_X = -0.6958259152521578 H3_DY_Y = -0.36988469555305414 H3_DY_Z = 0.6156391862601822 H3_DZ_X = 0.7032200810729137 H3_DZ_Y = -0.17665919923852869 H3_DZ_Z = 0.6886748470070572 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 138 H4_OUTID2_ORIG = 216 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 383.09169067551534 H4_P_Y = 85.7457300535964 H4_P_Z = 25.54350227315512 # Orientation: H4_DX_X = 0.7060363925884872 H4_DX_Y = 0.5777638413143933 H4_DX_Z = -0.4095138044197242 H4_DY_X = 0.06704894876139633 H4_DY_Y = -0.6302048580251096 H4_DY_Z = -0.7735284580360009 H4_DZ_X = -0.7049943622545243 H4_DZ_Y = 0.518681771986607 H4_DZ_Z = -0.4836860227442372 ############# END of Description of junction: j3