############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 16:63:72:99:108:171 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 233 S1_NAME_ID3 = 250 S1_NUM_ID5_ORIG = 233 S1_NUM_ID3_ORIG = 250 S1_NAME2_ID5 = 235 S1_NAME2_ID3 = 248 S1_NUM2_ID5_ORIG = 235 S1_NUM2_ID3_ORIG = 248 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 107 S2_NAME_ID3 = 118 S2_NUM_ID5_ORIG = 107 S2_NUM_ID3_ORIG = 118 S2_NAME2_ID5 = 109 S2_NAME2_ID3 = 116 S2_NUM2_ID5_ORIG = 109 S2_NUM2_ID3_ORIG = 116 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 268 S3_NAME_ID3 = 287 S3_NUM_ID5_ORIG = 268 S3_NUM_ID3_ORIG = 287 S3_NAME2_ID5 = 270 S3_NAME2_ID3 = 285 S3_NUM2_ID5_ORIG = 270 S3_NUM2_ID3_ORIG = 285 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 305 S4_NAME_ID3 = 310 S4_NUM_ID5_ORIG = 305 S4_NUM_ID3_ORIG = 310 S4_NAME2_ID5 = 307 S4_NAME2_ID3 = 308 S4_NUM2_ID5_ORIG = 307 S4_NUM2_ID3_ORIG = 308 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 235 H1_OUTID2_ORIG = 116 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 357.4032497134962 H1_P_Y = 110.47990276988253 H1_P_Z = 10.374232654797169 # Orientation: H1_DX_X = -0.4210679876349559 H1_DX_Y = 0.20736116027678975 H1_DX_Z = 0.8830079835413294 H1_DY_X = -0.8467190731458913 H1_DY_Y = -0.4389224391234592 H1_DY_Z = -0.3006890480295432 H1_DZ_X = 0.3252207880195215 H1_DZ_Y = -0.874270233762175 H1_DZ_Z = 0.36039283760557694 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 270 H2_OUTID2_ORIG = 248 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 372.7161960673918 H2_P_Y = 115.44163610639087 H2_P_Z = -10.576769789735739 # Orientation: H2_DX_X = -0.9208168967350616 H2_DX_Y = -0.3756992110500761 H2_DX_Z = -0.10462478436535427 H2_DY_X = 0.30718755520206287 H2_DY_Y = -0.5334311676515284 H2_DY_Z = -0.7880907278396982 H2_DZ_X = 0.24027494379595282 H2_DZ_Y = -0.7578266900778061 H2_DZ_Z = 0.606602554552456 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 307 H3_OUTID2_ORIG = 285 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 353.6828615238367 H3_P_Y = 120.04150424793889 H3_P_Z = 29.412980490718287 # Orientation: H3_DX_X = -0.263039231182006 H3_DX_Y = -0.4637807541271002 H3_DX_Z = -0.8460010490303773 H3_DY_X = 0.03456339616451487 H3_DY_Y = -0.8808472775717746 H3_DY_Z = 0.47213710428217226 H3_DZ_X = -0.964165823136625 H3_DZ_Y = 0.09494991150960175 H3_DZ_Z = 0.2477272286196026 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 109 H4_OUTID2_ORIG = 308 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 369.6798819240202 H4_P_Y = 116.9291664273161 H4_P_Z = 26.293176325335125 # Orientation: H4_DX_X = 0.07211581577575998 H4_DX_Y = 0.7578782832913333 H4_DX_Z = -0.648397884659083 H4_DY_X = 0.2302884412856656 H4_DY_Y = 0.6198728522741845 H4_DY_Z = 0.750149905568005 H4_DZ_X = 0.9704465688151913 H4_DZ_Y = -0.20341621058521753 H4_DZ_Z = -0.12982797212439934 ############# END of Description of junction: j4