############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 62:63:108:118:125:171 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 233 S1_NAME_ID3 = 238 S1_NUM_ID5_ORIG = 233 S1_NUM_ID3_ORIG = 238 S1_NAME2_ID5 = 235 S1_NAME2_ID3 = 236 S1_NUM2_ID5_ORIG = 235 S1_NUM2_ID3_ORIG = 236 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 107 S2_NAME_ID3 = 118 S2_NUM_ID5_ORIG = 107 S2_NUM_ID3_ORIG = 118 S2_NAME2_ID5 = 109 S2_NAME2_ID3 = 116 S2_NUM2_ID5_ORIG = 109 S2_NUM2_ID3_ORIG = 116 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 280 S3_NAME_ID3 = 287 S3_NUM_ID5_ORIG = 280 S3_NUM_ID3_ORIG = 287 S3_NAME2_ID5 = 282 S3_NAME2_ID3 = 285 S3_NUM2_ID5_ORIG = 282 S3_NUM2_ID3_ORIG = 285 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 305 S4_NAME_ID3 = 310 S4_NUM_ID5_ORIG = 305 S4_NUM_ID3_ORIG = 310 S4_NAME2_ID5 = 307 S4_NAME2_ID3 = 308 S4_NUM2_ID5_ORIG = 307 S4_NUM2_ID3_ORIG = 308 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 235 H1_OUTID2_ORIG = 116 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 357.4032497134962 H1_P_Y = 110.47990276988253 H1_P_Z = 10.374232654797169 # Orientation: H1_DX_X = -0.4210679876349559 H1_DX_Y = 0.20736116027678975 H1_DX_Z = 0.8830079835413294 H1_DY_X = -0.8467190731458913 H1_DY_Y = -0.4389224391234592 H1_DY_Z = -0.3006890480295432 H1_DZ_X = 0.3252207880195215 H1_DZ_Y = -0.874270233762175 H1_DZ_Z = 0.36039283760557694 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 282 H2_OUTID2_ORIG = 236 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 349.89964217886285 H2_P_Y = 127.89563770956954 H2_P_Z = 2.4135173462249995 # Orientation: H2_DX_X = -0.46037446857963005 H2_DX_Y = 0.7922435634941394 H2_DX_Z = 0.400506535255289 H2_DY_X = 0.5690392405675766 H2_DY_Y = 0.6096444428717973 H2_DY_Z = -0.5518405530312123 H2_DZ_X = -0.6813587097662435 H2_DZ_Y = -0.02614936667839629 H2_DZ_Z = -0.7314824121248522 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 307 H3_OUTID2_ORIG = 285 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 353.6308641226405 H3_P_Y = 120.14265721404884 H3_P_Z = 29.09701268943482 # Orientation: H3_DX_X = -0.2682612896269916 H3_DX_Y = -0.478265750129367 H3_DX_Z = -0.8362402482186972 H3_DY_X = 0.03511035589019684 H3_DY_Y = -0.8723351298789908 H3_DY_Z = 0.48764606436254354 H3_DZ_X = -0.9627061563098778 H3_DZ_Y = 0.10145586938271833 H3_DZ_Z = 0.25080582762539905 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 109 H4_OUTID2_ORIG = 308 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 369.85010906580067 H4_P_Y = 116.86054531671887 H4_P_Z = 26.46705850802201 # Orientation: H4_DX_X = 0.07283064107087966 H4_DX_Y = 0.744066982249862 H4_DX_Z = -0.6641235002970411 H4_DY_X = 0.2270276588162119 H4_DY_Y = 0.6360419282951142 H4_DY_Z = 0.7375019373418894 H4_DZ_X = 0.9711612326764225 H4_DZ_Y = -0.20448714232492193 H4_DZ_Z = -0.12260044359695854 ############# END of Description of junction: j4