############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 140 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 179 S1_NAME_ID3 = 185 S1_NUM_ID5_ORIG = 179 S1_NUM_ID3_ORIG = 185 S1_NAME2_ID5 = 180 S1_NAME2_ID3 = 184 S1_NUM2_ID5_ORIG = 180 S1_NUM2_ID3_ORIG = 184 S1_SQ2 = UAACG S1_SQLEN2 = 5 S1_SQ = AUAACGU S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 192 S2_NAME_ID3 = 196 S2_NUM_ID5_ORIG = 192 S2_NUM_ID3_ORIG = 196 S2_NAME2_ID5 = 193 S2_NAME2_ID3 = 195 S2_NUM2_ID5_ORIG = 193 S2_NUM2_ID3_ORIG = 195 S2_SQ2 = CCA S2_SQLEN2 = 3 S2_SQ = ACCAA S2_SQLEN = 5 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 180 H1_OUTID2_ORIG = 195 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 31.002407354450238 H1_P_Y = -68.26385595530614 H1_P_Z = 9.557960850906996 # Orientation: H1_DX_X = 0.5065683578780877 H1_DX_Y = 0.44410770984302417 H1_DX_Z = 0.7390242491655385 H1_DY_X = -0.5352125564945176 H1_DY_Y = -0.5100311347797231 H1_DY_Z = 0.6733615380506297 H1_DZ_X = 0.6759704269916682 H1_DZ_Y = -0.7366387062959063 H1_DZ_Z = -0.02067361166805526 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 193 H2_OUTID2_ORIG = 184 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 19.322709872145545 H2_P_Y = -49.26328678776244 H2_P_Z = 12.093844051864423 # Orientation: H2_DX_X = 0.9560861342581788 H2_DX_Y = 0.08009910616964078 H2_DX_Z = -0.28192807073804893 H2_DY_X = -0.20791489143839925 H2_DY_Y = -0.49261285340165983 H2_DY_Z = -0.845046729229594 H2_DZ_X = -0.20656887906315902 H2_DZ_Y = 0.8665545048375805 H2_DZ_Z = -0.45432652173111165 ############# END of Description of junction: j9