############# Start of Description of junction: j48 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS4HS1 FINGERPRINT = 29:65:132:140:145:149 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1154 S1_NAME_ID3 = 1161 S1_NUM_ID5_ORIG = 1154 S1_NUM_ID3_ORIG = 1161 S1_NAME2_ID5 = 1155 S1_NAME2_ID3 = 1160 S1_NUM2_ID5_ORIG = 1155 S1_NUM2_ID3_ORIG = 1160 S1_SQ2 = AGACUG S1_SQLEN2 = 6 S1_SQ = GAGACUGC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1115 S2_NAME_ID3 = 1119 S2_NUM_ID5_ORIG = 1115 S2_NUM_ID3_ORIG = 1119 S2_NAME2_ID5 = 1116 S2_NAME2_ID3 = 1118 S2_NUM2_ID5_ORIG = 1116 S2_NUM2_ID3_ORIG = 1118 S2_SQ2 = UAU S2_SQLEN2 = 3 S2_SQ = UUAUC S2_SQLEN = 5 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1175 S3_NAME_ID3 = 1178 S3_NUM_ID5_ORIG = 1175 S3_NUM_ID3_ORIG = 1178 S3_NAME2_ID5 = 1176 S3_NAME2_ID3 = 1177 S3_NUM2_ID5_ORIG = 1176 S3_NUM2_ID3_ORIG = 1177 S3_SQ2 = AG S3_SQLEN2 = 2 S3_SQ = GAGG S3_SQLEN = 4 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1180 S4_NAME_ID3 = 1185 S4_NUM_ID5_ORIG = 1180 S4_NUM_ID3_ORIG = 1185 S4_NAME2_ID5 = 1181 S4_NAME2_ID3 = 1184 S4_NUM2_ID5_ORIG = 1181 S4_NUM2_ID3_ORIG = 1184 S4_SQ2 = GGUG S4_SQLEN2 = 4 S4_SQ = AGGUGG S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1155 H1_OUTID2_ORIG = 1118 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 94.26349622792439 H1_P_Y = 118.55965858127949 H1_P_Z = -30.728928267979242 # Orientation: H1_DX_X = -0.36025909181594784 H1_DX_Y = 0.5256023467375428 H1_DX_Z = 0.7706851236840642 H1_DY_X = -0.10881956695605766 H1_DY_Y = -0.8441979649890214 H1_DY_Z = 0.5248696007161051 H1_DZ_X = 0.9264835069289887 H1_DZ_Y = 0.10522342425700515 H1_DZ_Z = 0.36132581194288704 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 1176 H2_OUTID2_ORIG = 1160 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 66.39310880140208 H2_P_Y = 127.477047793207 H2_P_Z = -25.413146549500805 # Orientation: H2_DX_X = 0.2905989737455599 H2_DX_Y = -0.5810114556019812 H2_DX_Z = 0.7602485941567316 H2_DY_X = -0.0023373950493663642 H2_DY_Y = 0.794103461362127 H2_DY_Z = 0.6077781085536778 H2_DZ_X = -0.9568420836493345 H2_DZ_Y = -0.1783966959109904 H2_DZ_Z = 0.22940759761968366 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 1181 H3_OUTID2_ORIG = 1177 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 85.63371628904412 H3_P_Y = 134.4558713336204 H3_P_Z = -23.116812956080107 # Orientation: H3_DX_X = -0.4021338927127971 H3_DX_Y = -0.8269800993750493 H3_DX_Z = 0.39292778925555893 H3_DY_X = 0.0015646098029122868 H3_DY_Y = -0.4297769038039405 H3_DY_Z = -0.9029337544653231 H3_DZ_X = 0.9155795346816262 H3_DZ_Y = -0.3624854868740215 H3_DZ_Z = 0.17412176049503714 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1116 H4_OUTID2_ORIG = 1184 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 80.21137046149539 H4_P_Y = 119.99444106843013 H4_P_Z = -40.17215028537882 # Orientation: H4_DX_X = -0.09738169495314253 H4_DX_Y = 0.9949968475575304 H4_DX_Z = -0.022317679956238123 H4_DY_X = 0.7867452587375112 H4_DY_Y = 0.06322717183819293 H4_DY_Z = -0.6140311251031108 H4_DZ_X = -0.6095479499941803 H4_DZ_Y = -0.07735372060810164 H4_DZ_Z = -0.7889662214353521 ############# END of Description of junction: j48