############# Start of Description of junction: j40 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS2 FINGERPRINT = 177 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2736 S1_NAME_ID3 = 2743 S1_NUM_ID5_ORIG = 2736 S1_NUM_ID3_ORIG = 2743 S1_NAME2_ID5 = 2738 S1_NAME2_ID3 = 2741 S1_NUM2_ID5_ORIG = 2738 S1_NUM2_ID3_ORIG = 2741 S1_SQ2 = AUAA S1_SQLEN2 = 4 S1_SQ = AGAUAAGU S1_SQLEN = 8 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 2761 S2_NAME_ID3 = 2768 S2_NUM_ID5_ORIG = 2761 S2_NUM_ID3_ORIG = 2768 S2_NAME2_ID5 = 2763 S2_NAME2_ID3 = 2766 S2_NUM2_ID5_ORIG = 2763 S2_NUM2_ID3_ORIG = 2766 S2_SQ2 = GAAA S2_SQLEN2 = 4 S2_SQ = ACGAAACU S2_SQLEN = 8 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 2738 H1_OUTID2_ORIG = 2766 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 35.61884863256144 H1_P_Y = 150.82990742061025 H1_P_Z = -184.92285813917567 # Orientation: H1_DX_X = 0.14353780302553787 H1_DX_Y = 0.927707882938563 H1_DX_Z = -0.34460844887533426 H1_DY_X = -0.022950958111437103 H1_DY_Y = -0.34500014561709236 H1_DY_Z = -0.9383219879369733 H1_DZ_X = -0.9893786699865572 H1_DZ_Y = 0.14259377075399016 H1_DZ_Z = -0.02822877818439906 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 2763 H2_OUTID2_ORIG = 2741 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 59.78296321314378 H2_P_Y = 151.16835128908465 H2_P_Z = -187.8208738076999 # Orientation: H2_DX_X = -0.12287424154294513 H2_DX_Y = -0.674641880739415 H2_DX_Z = 0.7278463117428373 H2_DY_X = -0.13864542380325418 H2_DY_Y = -0.7145422416733425 H2_DY_Z = -0.6857162906937901 H2_DZ_X = 0.9826898631937055 H2_DZ_Y = -0.18516942948787118 H2_DZ_Z = -0.005737173474528845 ############# END of Description of junction: j40