#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS3
FINGERPRINT = 140
LOOP_LENGTH_SUM = 5
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  33
S1_NAME_ID3 = 41
S1_NUM_ID5_ORIG =  33
S1_NUM_ID3_ORIG = 41
S1_NAME2_ID5 =  35
S1_NAME2_ID3 = 39
S1_NUM2_ID5_ORIG =  35
S1_NUM2_ID3_ORIG = 39
S1_SQ2 = CUAAG
S1_SQLEN2 = 5
S1_SQ = UCCUAAGUC
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  3
S2_NAME_ID3 = 10
S2_NUM_ID5_ORIG =  3
S2_NUM_ID3_ORIG = 10
S2_NAME2_ID5 =  5
S2_NAME2_ID3 = 8
S2_NUM2_ID5_ORIG =  5
S2_NUM2_ID3_ORIG = 8
S2_SQ2 = UAUG
S2_SQLEN2 = 4
S2_SQ = GAUAUGGA
S2_SQLEN = 8
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 35
H1_OUTID2_ORIG = 8
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -8.99951417235012
H1_P_Y = -9.303811799072626
H1_P_Z = -2.042502541082583
# Orientation:
H1_DX_X = 0.984065174966446
H1_DX_Y = 0.15253364210843046
H1_DX_Z = -0.09137406329695086
H1_DY_X = -0.1380498057977384
H1_DY_Y = 0.3315469392707495
H1_DY_Z = -0.9332839215262441
H1_DZ_X = -0.1120624046568004
H1_DZ_Y = 0.9310263772231888
H1_DZ_Z = 0.34732103647375023
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 5
H2_OUTID2_ORIG = 39
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -0.6218744624147572
H2_P_Y = -38.58902571809328
H2_P_Z = -2.892476916709282
# Orientation:
H2_DX_X = -0.8896014799373231
H2_DX_Y = 0.39411271629072075
H2_DX_Z = 0.23083408273319606
H2_DY_X = -0.2679857370375891
H2_DY_Y = -0.04113668605113219
H2_DY_Z = -0.9625442419988546
H2_DZ_X = -0.36985517657286526
H2_DZ_Y = -0.9181410239819812
H2_DZ_Z = 0.14221184354185512
#############  END of Description of junction: j1