#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS1HS2HS5
FINGERPRINT = 69:77:93:121:160:170
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 28
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 28
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 27
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 27
S1_SQ2 = CAU
S1_SQLEN2 = 3
S1_SQ = GCAUG
S1_SQLEN = 5
S1_CHAR = T
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 11
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 11
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = GUAG
S2_SQLEN2 = 4
S2_SQ = GGUAGC
S2_SQLEN = 6
S2_CHAR = T
## Properties of strand 3
S3_NAME_ID5 =  42
S3_NAME_ID3 = 50
S3_NUM_ID5_ORIG =  42
S3_NUM_ID3_ORIG = 50
S3_NAME2_ID5 =  43
S3_NAME2_ID3 = 49
S3_NUM2_ID5_ORIG =  43
S3_NUM2_ID3_ORIG = 49
S3_SQ2 = AGUGUCC
S3_SQLEN2 = 7
S3_SQ = CAGUGUCCG
S3_SQLEN = 9
S3_CHAR = T
## Properties of strand 4
S4_NAME_ID5 =  64
S4_NAME_ID3 = 67
S4_NUM_ID5_ORIG =  64
S4_NUM_ID3_ORIG = 67
S4_NAME2_ID5 =  65
S4_NAME2_ID3 = 66
S4_NUM2_ID5_ORIG =  65
S4_NUM2_ID3_ORIG = 66
S4_SQ2 = GC
S4_SQLEN2 = 2
S4_SQ = CGCC
S4_SQLEN = 4
S4_CHAR = T
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = T
H1_OUTSEQ_CHAR = T
# Position:
H1_P_X = 39.07392486648038
H1_P_Y = 2.1483857730939
H1_P_Z = -18.996681713492414
# Orientation:
H1_DX_X = -0.14764282700405573
H1_DX_Y = 0.8800216615626164
H1_DX_Z = 0.451401673473665
H1_DY_X = 0.7351435203092365
H1_DY_Y = -0.20767537184578067
H1_DY_Z = 0.645317708168669
H1_DZ_X = 0.6616385721688189
H1_DZ_Y = 0.4271215460607092
H1_DZ_Z = -0.6162804432310907
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 43
H2_OUTID2_ORIG = 27
H2_INSEQ_CHAR = T
H2_OUTSEQ_CHAR = T
# Position:
H2_P_X = 30.163240197810072
H2_P_Y = -6.343137551422566
H2_P_Z = -9.716044919154584
# Orientation:
H2_DX_X = -0.5760258304906181
H2_DX_Y = 0.6277868413647729
H2_DX_Z = -0.5235245213137922
H2_DY_X = -0.38401603490122227
H2_DY_Y = -0.7732044328464882
H2_DY_Z = -0.504664829332583
H2_DZ_X = -0.7216134197382544
H2_DZ_Y = -0.08965816658722581
H2_DZ_Z = 0.6864659391534875
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 65
H3_OUTID2_ORIG = 49
H3_INSEQ_CHAR = T
H3_OUTSEQ_CHAR = T
# Position:
H3_P_X = 48.37402479102988
H3_P_Y = 9.905592691638326
H3_P_Z = -36.48630104526845
# Orientation:
H3_DX_X = -0.9185002250327372
H3_DX_Y = 0.3584593413939672
H3_DX_Z = 0.16692584336229999
H3_DY_X = -0.07623554124003817
H3_DY_Y = 0.253696925992843
H3_DY_Z = -0.9642748633007159
H3_DZ_X = -0.38800190575130955
H3_DZ_Y = -0.8984123609507968
H3_DZ_Z = -0.20569334171081977
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 7
H4_OUTID2_ORIG = 66
H4_INSEQ_CHAR = T
H4_OUTSEQ_CHAR = T
# Position:
H4_P_X = 53.93113264090657
H4_P_Y = 19.808883255712264
H4_P_Z = -32.03937555523208
# Orientation:
H4_DX_X = -0.9467900067008941
H4_DX_Y = 0.19684821433000366
H4_DX_Z = 0.2546359435083865
H4_DY_X = 0.16329038338782453
H4_DY_Y = -0.3879872386656018
H4_DY_Z = 0.9070844245855518
H4_DZ_X = 0.27735344581305554
H4_DZ_Y = 0.9003980692714357
H4_DZ_Z = 0.335199019908913
#############  END of Description of junction: j1