############# Start of Description of junction: j5 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 150 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 279 S1_NAME_ID3 = 287 S1_NUM_ID5_ORIG = 279 S1_NUM_ID3_ORIG = 287 S1_NAME2_ID5 = 281 S1_NAME2_ID3 = 285 S1_NUM2_ID5_ORIG = 281 S1_NUM2_ID3_ORIG = 285 S1_SQ2 = GAAUC S1_SQLEN2 = 5 S1_SQ = CCGAAUCCC S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 354 S2_NAME_ID3 = 361 S2_NUM_ID5_ORIG = 354 S2_NUM_ID3_ORIG = 361 S2_NAME2_ID5 = 356 S2_NAME2_ID3 = 359 S2_NUM2_ID5_ORIG = 356 S2_NUM2_ID3_ORIG = 359 S2_SQ2 = GAUA S2_SQLEN2 = 4 S2_SQ = GGGAUAGG S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 281 H1_OUTID2_ORIG = 359 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 3.3779001578918177 H1_P_Y = 224.21058659136162 H1_P_Z = 161.7288859101102 # Orientation: H1_DX_X = -0.6091071370588934 H1_DX_Y = -0.7728301187197246 H1_DX_Z = -0.17810699925482254 H1_DY_X = -0.7579441262259641 H1_DY_Y = 0.5011360955992359 H1_DY_Z = 0.4175922834621417 H1_DZ_X = -0.23347204779901354 H1_DZ_Y = 0.3893535941624293 H1_DZ_Z = -0.8910076215214531 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 356 H2_OUTID2_ORIG = 285 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 6.801349657837467 H2_P_Y = 204.25138417112106 H2_P_Z = 179.5401421320348 # Orientation: H2_DX_X = 0.8389401085652786 H2_DX_Y = 0.5396780151435792 H2_DX_Z = 0.07019354821622414 H2_DY_X = -0.347710507648582 H2_DY_Y = 0.432309678058175 H2_DY_Z = 0.8319890294517052 H2_DZ_X = 0.4186608378045955 H2_DZ_Y = -0.7223960009772554 H2_DZ_Z = 0.5503336448562948 ############# END of Description of junction: j5