############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 147 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -39.30943641302832 H1_P_Y = 40.28700658326264 H1_P_Z = -52.76748907615916 # Orientation: H1_DX_X = -0.36080413746636 H1_DX_Y = 0.9300691933053216 H1_DX_Z = 0.06922188997383216 H1_DY_X = 0.6661145642273283 H1_DY_Y = 0.3089328359649386 H1_DY_Z = -0.6788607295954705 H1_DZ_X = -0.6527723659219902 H1_DZ_Y = -0.19882605092657002 H1_DZ_Z = -0.730996880815205 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -33.29637326533557 H2_P_Y = 48.06109935270416 H2_P_Z = -30.85602181260941 # Orientation: H2_DX_X = 0.011207174417009469 H2_DX_Y = -0.9949177426670985 H2_DX_Z = -0.10006540145219134 H2_DY_X = 0.9750620742901219 H2_DY_Y = 0.03305571748666125 H2_DY_Z = -0.21945676299100114 H2_DZ_X = 0.2216491608886244 H2_DZ_Y = -0.09511048768481345 H2_DZ_Z = 0.9704770191043792 ############# END of Description of junction: j9