############# Start of Description of junction: j35 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS5 FINGERPRINT = 73 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1813 S1_NAME_ID3 = 1823 S1_NUM_ID5_ORIG = 1813 S1_NUM_ID3_ORIG = 1823 S1_NAME2_ID5 = 1815 S1_NAME2_ID3 = 1821 S1_NUM2_ID5_ORIG = 1815 S1_NUM2_ID3_ORIG = 1821 S1_SQ2 = AGGUAUA S1_SQLEN2 = 7 S1_SQ = GGAGGUAUAGG S1_SQLEN = 11 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1796 S2_NAME_ID3 = 1804 S2_NUM_ID5_ORIG = 1796 S2_NUM_ID3_ORIG = 1804 S2_NAME2_ID5 = 1798 S2_NAME2_ID3 = 1802 S2_NUM2_ID5_ORIG = 1798 S2_NUM2_ID3_ORIG = 1802 S2_SQ2 = UGCGA S2_SQLEN2 = 5 S2_SQ = UCUGCGAAC S2_SQLEN = 9 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 1815 H1_OUTID2_ORIG = 1802 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = -56.95532686231328 H1_P_Y = -18.564570338275875 H1_P_Z = 45.43032851577525 # Orientation: H1_DX_X = -0.4896304198899557 H1_DX_Y = 0.21661803322824724 H1_DX_Z = -0.8445937956193532 H1_DY_X = 0.46245265196107965 H1_DY_Y = -0.7566667075794236 H1_DY_Z = -0.4621612687526664 H1_DZ_X = -0.7391884716447805 H1_DZ_Y = -0.6168728566902892 H1_DZ_Z = 0.27031145381987187 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 1798 H2_OUTID2_ORIG = 1821 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -61.88213650688874 H2_P_Y = -9.452465843460141 H2_P_Z = 25.31203619647866 # Orientation: H2_DX_X = 0.255529017037027 H2_DX_Y = -0.6536753271145184 H2_DX_Z = 0.712329620452369 H2_DY_X = -0.9665628833816342 H2_DY_Y = -0.156361278178073 H2_DY_Z = 0.20324208017904155 H2_DZ_X = -0.02147356330643646 H2_DZ_Y = -0.7404456208313004 H2_DZ_Z = -0.6717731526867361 ############# END of Description of junction: j35