############# Start of Description of junction: j21 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS5HS2 FINGERPRINT = 37:47:134:137:155:172 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1292 S1_NAME_ID3 = 1297 S1_NUM_ID5_ORIG = 1292 S1_NUM_ID3_ORIG = 1297 S1_NAME2_ID5 = 1294 S1_NAME2_ID3 = 1295 S1_NUM2_ID5_ORIG = 1294 S1_NUM2_ID3_ORIG = 1295 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = GCUCGC S1_SQLEN = 6 S1_CHAR = B ## Properties of strand 2 S2_NAME_ID5 = 1268 S2_NAME_ID3 = 1278 S2_NUM_ID5_ORIG = 1268 S2_NUM_ID3_ORIG = 1278 S2_NAME2_ID5 = 1270 S2_NAME2_ID3 = 1276 S2_NUM2_ID5_ORIG = 1270 S2_NUM2_ID3_ORIG = 1276 S2_SQ2 = CGAUAAA S2_SQLEN2 = 7 S2_SQ = AACGAUAAAGC S2_SQLEN = 11 S2_CHAR = B ## Properties of strand 3 S3_NAME_ID5 = 1643 S3_NAME_ID3 = 1650 S3_NUM_ID5_ORIG = 1643 S3_NUM_ID3_ORIG = 1650 S3_NAME2_ID5 = 1645 S3_NAME2_ID3 = 1648 S3_NUM2_ID5_ORIG = 1645 S3_NUM2_ID3_ORIG = 1648 S3_SQ2 = GCUU S3_SQLEN2 = 4 S3_SQ = GCGCUUGA S3_SQLEN = 8 S3_CHAR = B ## Properties of strand 4 S4_NAME_ID5 = 2007 S4_NAME_ID3 = 2012 S4_NUM_ID5_ORIG = 2007 S4_NUM_ID3_ORIG = 2012 S4_NAME2_ID5 = 2009 S4_NAME2_ID3 = 2010 S4_NUM2_ID5_ORIG = 2009 S4_NUM2_ID3_ORIG = 2010 S4_SQ2 = AG S4_SQLEN2 = 2 S4_SQ = UCAGUG S4_SQLEN = 6 S4_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1294 H1_OUTID2_ORIG = 1276 H1_INSEQ_CHAR = B H1_OUTSEQ_CHAR = B # Position: H1_P_X = 73.97044092951737 H1_P_Y = 22.15621275955556 H1_P_Z = -4.753555843618262 # Orientation: H1_DX_X = -0.06110902215195324 H1_DX_Y = 0.6694336723870435 H1_DX_Z = -0.7403541353204135 H1_DY_X = 0.7376656609844616 H1_DY_Y = 0.5299662409359769 H1_DY_Z = 0.4183122710040168 H1_DZ_X = 0.6723950178399463 H1_DZ_Y = -0.5205711687585008 H1_DZ_Z = -0.5262039511837848 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1645 H2_OUTID2_ORIG = 1295 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = B # Position: H2_P_X = 61.3977867225733 H2_P_Y = 31.48951120939538 H2_P_Z = 6.202992308668776 # Orientation: H2_DX_X = -0.6544979739229007 H2_DX_Y = -0.3839262164425321 H2_DX_Z = -0.6513317606711233 H2_DY_X = -0.21505114440007844 H2_DY_Y = -0.7313617412260669 H2_DY_Z = 0.6471962675749872 H2_DZ_X = -0.7248347449060617 H2_DZ_Y = 0.5636582863747321 H2_DZ_Z = 0.39611100562602086 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 2009 H3_OUTID2_ORIG = 1648 H3_INSEQ_CHAR = B H3_OUTSEQ_CHAR = B # Position: H3_P_X = 56.66523956955375 H3_P_Y = 14.023204964431638 H3_P_Z = -18.105308746936966 # Orientation: H3_DX_X = 0.9115164835855509 H3_DX_Y = 0.4010635989258855 H3_DX_Z = 0.09102576431123666 H3_DY_X = 0.09454313796918967 H3_DY_Y = 0.011057647195732656 H3_DY_Z = -0.9954593530131888 H3_DZ_X = -0.40024904149137797 H3_DZ_Y = 0.9159834704049583 H3_DZ_Z = -0.027838583479088186 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 1270 H4_OUTID2_ORIG = 2010 H4_INSEQ_CHAR = B H4_OUTSEQ_CHAR = B # Position: H4_P_X = 61.14105598425956 H4_P_Y = -0.55699205240861 H4_P_Z = -20.35113920803901 # Orientation: H4_DX_X = 0.12403027728971949 H4_DX_Y = -0.23200025653084677 H4_DX_Z = 0.9647758140029481 H4_DY_X = -0.9899389902208711 H4_DY_Y = -0.09565601274578928 H4_DY_Z = 0.1042627587686944 H4_DZ_X = 0.06809762078014359 H4_DZ_Y = -0.9680009339846729 H4_DZ_Z = -0.24153034146641872 ############# END of Description of junction: j21