#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS2HS4
FINGERPRINT = 85:89:90:96:173:178
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  23
S1_NAME_ID3 = 28
S1_NUM_ID5_ORIG =  23
S1_NUM_ID3_ORIG = 28
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 26
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 26
S1_SQ2 = CG
S1_SQLEN2 = 2
S1_SQ = CACGCU
S1_SQLEN = 6
S1_CHAR = F
## Properties of strand 2
S2_NAME_ID5 =  5
S2_NAME_ID3 = 12
S2_NUM_ID5_ORIG =  5
S2_NUM_ID3_ORIG = 12
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = GUGG
S2_SQLEN2 = 4
S2_SQ = AGGUGGUG
S2_SQLEN = 8
S2_CHAR = F
## Properties of strand 3
S3_NAME_ID5 =  42
S3_NAME_ID3 = 51
S3_NUM_ID5_ORIG =  42
S3_NUM_ID3_ORIG = 51
S3_NAME2_ID5 =  44
S3_NAME2_ID3 = 49
S3_NUM2_ID5_ORIG =  44
S3_NUM2_ID3_ORIG = 49
S3_SQ2 = UGCUUA
S3_SQLEN2 = 6
S3_SQ = AGUGCUUACG
S3_SQLEN = 10
S3_CHAR = F
## Properties of strand 4
S4_NAME_ID5 =  63
S4_NAME_ID3 = 68
S4_NUM_ID5_ORIG =  63
S4_NUM_ID3_ORIG = 68
S4_NAME2_ID5 =  65
S4_NAME2_ID3 = 66
S4_NUM2_ID5_ORIG =  65
S4_NUM2_ID3_ORIG = 66
S4_SQ2 = UC
S4_SQLEN2 = 2
S4_SQ = CGUCCU
S4_SQLEN = 6
S4_CHAR = F
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = F
H1_OUTSEQ_CHAR = F
# Position:
H1_P_X = 22.259919096226934
H1_P_Y = -25.25036219147638
H1_P_Z = 21.792430173451407
# Orientation:
H1_DX_X = 0.5738372572777948
H1_DX_Y = -0.10141412660014026
H1_DX_Z = -0.8126659689477762
H1_DY_X = 0.36685627376857255
H1_DY_Y = 0.9190087411482182
H1_DY_Z = 0.1443586093373206
H1_DZ_X = 0.7322071268135382
H1_DZ_Y = -0.38096995763327257
H1_DZ_Z = 0.5645658640268358
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 3
H2_OUTID2 = 4
H2_INID2_ORIG = 44
H2_OUTID2_ORIG = 26
H2_INSEQ_CHAR = F
H2_OUTSEQ_CHAR = F
# Position:
H2_P_X = 9.873919500999122
H2_P_Y = -15.273944279095918
H2_P_Z = 11.42377762298796
# Orientation:
H2_DX_X = -0.3566373420760556
H2_DX_Y = -0.9061401190339637
H2_DX_Z = -0.22742007588170665
H2_DY_X = -0.676697128910309
H2_DY_Y = 0.08271892389385194
H2_DY_Z = 0.7316000104937057
H2_DZ_X = -0.6441201766452238
H2_DZ_Y = 0.41481039561100275
H2_DZ_Z = -0.6426830740976222
## Properties of helix 3
H3_INID = 1
H3_OUTID = 10
H3_INID2 = 3
H3_OUTID2 = 8
H3_INID2_ORIG = 65
H3_OUTID2_ORIG = 49
H3_INSEQ_CHAR = F
H3_OUTSEQ_CHAR = F
# Position:
H3_P_X = 28.704155908410275
H3_P_Y = -38.54534852983133
H3_P_Z = 34.37838190435695
# Orientation:
H3_DX_X = -0.7100127101597096
H3_DX_Y = -0.7025525299840822
H3_DX_Z = -0.04797805774131092
H3_DY_X = 0.5033234891138889
H3_DY_Y = -0.5539568484590802
H3_DY_Z = 0.6631721310123808
H3_DZ_X = -0.49249103211925416
H3_DZ_Y = 0.44671215861922775
H3_DZ_Z = 0.746927593963342
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 7
H4_OUTID2_ORIG = 66
H4_INSEQ_CHAR = F
H4_OUTSEQ_CHAR = F
# Position:
H4_P_X = 40.461340926874335
H4_P_Y = -44.96236964744308
H4_P_Z = 21.679440705074924
# Orientation:
H4_DX_X = -0.8066945242261241
H4_DX_Y = 0.10011068136353884
H4_DX_Z = -0.5824275028366337
H4_DY_X = 0.3141841600501536
H4_DY_Y = 0.9073792393841842
H4_DY_Z = -0.27919747403613826
H4_DZ_X = 0.5005319751595962
H4_DZ_Y = -0.40821656925155025
H4_DZ_Z = -0.7634310541439362
#############  END of Description of junction: j1