#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS4HS4
FINGERPRINT = 129
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  2
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  4
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  4
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = CCGATA
S1_SQLEN2 = 6
S1_SQ = TACCGATAAG
S1_SQLEN = 10
S1_CHAR = T
## Properties of strand 2
S2_NAME_ID5 =  4
S2_NAME_ID3 = 13
S2_NUM_ID5_ORIG =  4
S2_NUM_ID3_ORIG = 13
S2_NAME2_ID5 =  6
S2_NAME2_ID3 = 11
S2_NUM2_ID5_ORIG =  6
S2_NUM2_ID3_ORIG = 11
S2_SQ2 = TATCGG
S2_SQLEN2 = 6
S2_SQ = CTTATCGGTA
S2_SQLEN = 10
S2_CHAR = N
## Properties of helix 1
H1_INID = 1
H1_OUTID = 10
H1_INID2 = 3
H1_OUTID2 = 8
H1_INID2_ORIG = 4
H1_OUTID2_ORIG = 11
H1_INSEQ_CHAR = T
H1_OUTSEQ_CHAR = N
# Position:
H1_P_X = 58.65054781993099
H1_P_Y = -28.73681187185361
H1_P_Z = 95.03104383979087
# Orientation:
H1_DX_X = 0.5152265417810256
H1_DX_Y = -0.5962083945273662
H1_DX_Z = -0.6156924239743944
H1_DY_X = 0.6728189809088079
H1_DY_Y = 0.7263714749748225
H1_DY_Z = -0.14035347972793488
H1_DZ_X = 0.5309013369480269
H1_DZ_Y = -0.34193571126457556
H1_DZ_Z = 0.7753861875148402
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 6
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = N
H2_OUTSEQ_CHAR = T
# Position:
H2_P_X = 35.368558946171206
H2_P_Y = -32.13221044217357
H2_P_Z = 73.40223203668066
# Orientation:
H2_DX_X = 0.07947263051526932
H2_DX_Y = 0.9905644965404008
H2_DX_Z = 0.11165159735817554
H2_DY_X = 0.09828249371012987
H2_DY_Y = 0.10367389430111729
H2_DY_Z = -0.989743540049929
H2_DZ_X = -0.9919801673567363
H2_DZ_Y = 0.08963092007834916
H2_DZ_Z = -0.08911591180483924
#############  END of Description of junction: j1