############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS5 FINGERPRINT = 63 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 95 S1_NAME_ID3 = 105 S1_NUM_ID5_ORIG = 95 S1_NUM_ID3_ORIG = 105 S1_NAME2_ID5 = 97 S1_NAME2_ID3 = 103 S1_NUM2_ID5_ORIG = 97 S1_NUM2_ID3_ORIG = 103 S1_SQ2 = UUUGACU S1_SQLEN2 = 7 S1_SQ = GCUUUGACUCG S1_SQLEN = 11 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 78 S2_NAME_ID3 = 85 S2_NUM_ID5_ORIG = 78 S2_NUM_ID3_ORIG = 85 S2_NAME2_ID5 = 80 S2_NAME2_ID3 = 83 S2_NUM2_ID5_ORIG = 80 S2_NUM2_ID3_ORIG = 83 S2_SQ2 = ACGA S2_SQLEN2 = 4 S2_SQ = CGACGAGC S2_SQLEN = 8 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 97 H1_OUTID2_ORIG = 83 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = -30.90442366427223 H1_P_Y = 146.04266710624282 H1_P_Z = 129.90674581102596 # Orientation: H1_DX_X = 0.5417055123947883 H1_DX_Y = 0.5696163939468306 H1_DX_Z = -0.6181361513357047 H1_DY_X = 0.37456295840628684 H1_DY_Y = 0.49475443594059243 H1_DY_Z = 0.7841687562680875 H1_DZ_X = 0.7525009820797735 H1_DZ_Y = -0.6563194434603759 H1_DZ_Z = 0.05465400355734573 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 80 H2_OUTID2_ORIG = 103 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = -21.322647061163405 H2_P_Y = 165.19244955774292 H2_P_Z = 119.39355159238939 # Orientation: H2_DX_X = 0.20194097026952562 H2_DX_Y = -0.29844361140516185 H2_DX_Z = -0.9328189831570057 H2_DY_X = -0.3258716105905286 H2_DY_Y = 0.8776999681675761 H2_DY_Z = -0.35135517541337435 H2_DZ_X = 0.9235948992592675 H2_DZ_Y = 0.3749322294629849 H2_DZ_Z = 0.07998928285823581 ############# END of Description of junction: j3