############# Start of Description of junction: j17 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS5HS2 FINGERPRINT = 32:49:135:138:154:168 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1305 S1_NAME_ID3 = 1310 S1_NUM_ID5_ORIG = 1305 S1_NUM_ID3_ORIG = 1310 S1_NAME2_ID5 = 1307 S1_NAME2_ID3 = 1308 S1_NUM2_ID5_ORIG = 1307 S1_NUM2_ID3_ORIG = 1308 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CUUCGC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1281 S2_NAME_ID3 = 1291 S2_NUM_ID5_ORIG = 1281 S2_NUM_ID3_ORIG = 1291 S2_NAME2_ID5 = 1283 S2_NAME2_ID3 = 1289 S2_NUM2_ID5_ORIG = 1283 S2_NUM2_ID3_ORIG = 1289 S2_SQ2 = CGAUAAA S2_SQLEN2 = 7 S2_SQ = AACGAUAAAAG S2_SQLEN = 11 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1660 S3_NAME_ID3 = 1667 S3_NUM_ID5_ORIG = 1660 S3_NUM_ID3_ORIG = 1667 S3_NAME2_ID5 = 1662 S3_NAME2_ID3 = 1665 S3_NUM2_ID5_ORIG = 1662 S3_NUM2_ID3_ORIG = 1665 S3_SQ2 = GCGC S3_SQLEN2 = 4 S3_SQ = GCGCGCGA S3_SQLEN = 8 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1990 S4_NAME_ID3 = 1995 S4_NUM_ID5_ORIG = 1990 S4_NUM_ID3_ORIG = 1995 S4_NAME2_ID5 = 1992 S4_NAME2_ID3 = 1993 S4_NUM2_ID5_ORIG = 1992 S4_NUM2_ID3_ORIG = 1993 S4_SQ2 = GG S4_SQLEN2 = 2 S4_SQ = UCGGUG S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 1307 H1_OUTID2_ORIG = 1289 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 14.338725805864952 H1_P_Y = 120.83475707339183 H1_P_Z = 165.53056867678885 # Orientation: H1_DX_X = 0.3635405555358773 H1_DX_Y = -0.7729027456595361 H1_DX_Z = 0.5200573143727638 H1_DY_X = -0.5436686431999487 H1_DY_Y = 0.2773009367973742 H1_DY_Z = 0.7921670258552922 H1_DZ_X = -0.7564804497683966 H1_DZ_Y = -0.5707236951479047 H1_DZ_Z = -0.3193928504443022 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1662 H2_OUTID2_ORIG = 1308 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 28.668270150930287 H2_P_Y = 131.8686162791764 H2_P_Z = 172.09039739246765 # Orientation: H2_DX_X = 0.5244291315241654 H2_DX_Y = -0.5295898765832305 H2_DX_Z = -0.6667148180664242 H2_DY_X = -0.06259656869740127 H2_DY_Y = 0.7569316181807153 H2_DY_Z = -0.6504891966709465 H2_DZ_X = 0.8491500194878014 H2_DZ_Y = 0.382869544386665 H2_DZ_Z = 0.3638064820547129 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1992 H3_OUTID2_ORIG = 1665 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 28.48703169318585 H3_P_Y = 111.10491800876126 H3_P_Z = 149.9823304946619 # Orientation: H3_DX_X = -0.6901201049092016 H3_DX_Y = -0.1308058183673637 H3_DX_Z = 0.7117753006963312 H3_DY_X = 0.06443074821574157 H3_DY_Y = -0.99072930711705 H3_DY_Z = -0.11959982735658059 H3_DZ_X = 0.7208210037758889 H3_DZ_Y = -0.036678030217089486 H3_DZ_Z = 0.6921501301126227 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 1283 H4_OUTID2_ORIG = 1993 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 20.291583638805644 H4_P_Y = 109.31633583355212 H4_P_Z = 137.67599285748307 # Orientation: H4_DX_X = -0.29904353760275626 H4_DX_Y = 0.9537519777850747 H4_DX_Z = -0.030497991558121385 H4_DY_X = 0.8804716463600641 H4_DY_Y = 0.2634631184270546 H4_DY_Z = -0.39415335237021054 H4_DZ_X = -0.367889443412043 H4_DZ_Y = -0.14472162968863245 H4_DZ_Z = -0.9185385170618758 ############# END of Description of junction: j17