#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:76:77:80:85:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.83467846309467
H1_P_Y = 127.58116684216736
H1_P_Z = 37.373062838531915
# Orientation:
H1_DX_X = -0.1780463347586121
H1_DX_Y = -0.9344632555778958
H1_DX_Z = 0.3083470879605841
H1_DY_X = -0.5783396968407573
H1_DY_Y = -0.15414802007009598
H1_DY_Z = -0.8011002327840302
H1_DZ_X = 0.7961298246750701
H1_DZ_Y = -0.3209623215943225
H1_DZ_Z = -0.512991705955983
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.73040019990046
H2_P_Y = 144.2755743840236
H2_P_Z = 56.03554182706959
# Orientation:
H2_DX_X = -0.6326119442960021
H2_DX_Y = 0.4466807775218342
H2_DX_Z = 0.6326755969108504
H2_DY_X = 0.2411203399541364
H2_DY_Y = -0.6627191877369967
H2_DY_Z = 0.7089881944472936
H2_DZ_X = 0.7359776556353097
H2_DZ_Y = 0.6010653551800544
H2_DZ_Z = 0.31154025294952703
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.646893599918528
H3_P_Y = 171.83996448828546
H3_P_Z = 66.39703864103193
# Orientation:
H3_DX_X = -0.7064010686006235
H3_DX_Y = 0.6921774956557272
H3_DX_Z = -0.14794541151270835
H3_DY_X = -0.3432367785192376
H3_DY_Y = -0.1521885943955681
H3_DY_Z = 0.926837173190421
H3_DZ_X = 0.6190202291941915
H3_DZ_Y = 0.705499076004827
H3_DZ_Z = 0.345086959482245
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 28.461236721353774
H4_P_Y = 142.29434222401812
H4_P_Z = 69.39535647092352
# Orientation:
H4_DX_X = -0.7454153296163568
H4_DX_Y = -0.6546373262222858
H4_DX_Z = -0.12572174628714095
H4_DY_X = 0.6082423201189542
H4_DY_Y = -0.7451227837276804
H4_DY_Z = 0.2735567896913125
H4_DZ_X = -0.27275862294205666
H4_DZ_Y = 0.1274441379054565
H4_DZ_Z = 0.9536040715749294
#############  END of Description of junction: j1