############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 131 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 370 S1_NAME_ID3 = 378 S1_NUM_ID5_ORIG = 370 S1_NUM_ID3_ORIG = 378 S1_NAME2_ID5 = 372 S1_NAME2_ID3 = 376 S1_NUM2_ID5_ORIG = 372 S1_NUM2_ID3_ORIG = 376 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = CGCAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 385 S2_NAME_ID3 = 391 S2_NUM_ID5_ORIG = 385 S2_NUM_ID3_ORIG = 391 S2_NAME2_ID5 = 387 S2_NAME2_ID3 = 389 S2_NUM2_ID5_ORIG = 387 S2_NUM2_ID3_ORIG = 389 S2_SQ2 = UGA S2_SQLEN2 = 3 S2_SQ = CCUGACG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 372 H1_OUTID2_ORIG = 389 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 133.62676894965855 H1_P_Y = 65.10344255192791 H1_P_Z = 18.81490085043309 # Orientation: H1_DX_X = -0.816529820333102 H1_DX_Y = 0.5558832037336572 H1_DX_Z = 0.15579767749742857 H1_DY_X = 0.1025147421758561 H1_DY_Y = -0.125966875818051 H1_DY_Z = 0.9867234029013616 H1_DZ_X = 0.5681283130978443 H1_DZ_Y = 0.8216606416297765 H1_DZ_Z = 0.04586948716900352 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 387 H2_OUTID2_ORIG = 376 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.53002251192657 H2_P_Y = 60.26128301196824 H2_P_Z = 16.95188860687217 # Orientation: H2_DX_X = 0.43355886036377456 H2_DX_Y = -0.08817695461654296 H2_DX_Z = -0.8968007243945628 H2_DY_X = 0.10276445495371433 H2_DY_Y = -0.9838703126807218 H2_DY_Z = 0.14641951585631574 H2_DZ_X = -0.8952464361270245 H2_DZ_Y = -0.1556407160741884 H2_DZ_Z = -0.417504234830961 ############# END of Description of junction: j9