############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 145 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 115.50269612305081 H1_P_Y = 100.26272133170882 H1_P_Z = -19.071536880038394 # Orientation: H1_DX_X = 0.12790277288286234 H1_DX_Y = 0.9606225736229845 H1_DX_Z = 0.24666810035922992 H1_DY_X = -0.9805674625915515 H1_DY_Y = 0.08517879000282846 H1_DY_Z = 0.1767258471203874 H1_DZ_X = 0.14875594776559353 H1_DZ_Y = -0.26447843915829594 H1_DZ_Z = 0.9528498429578249 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 122.13607463965069 H2_P_Y = 111.05363362519859 H2_P_Z = -39.26883270967958 # Orientation: H2_DX_X = 0.2051147829210862 H2_DX_Y = -0.9785043283102937 H2_DX_Z = -0.021382359675129692 H2_DY_X = -0.8817532943294992 H2_DY_Y = -0.1752638023588986 H2_DY_Z = -0.43794260756607173 H2_DZ_X = 0.4247811833948276 H2_DZ_Y = 0.10868246896689016 H2_DZ_Z = -0.8987486117780392 ############# END of Description of junction: j13