#############  Start of Description of junction: j28
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS3HS4HS5
FINGERPRINT = 64:141:148
LOOP_LENGTH_SUM = 12
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  1105
S1_NAME_ID3 = 1115
S1_NUM_ID5_ORIG =  1105
S1_NUM_ID3_ORIG = 1115
S1_NAME2_ID5 =  1107
S1_NAME2_ID3 = 1113
S1_NUM2_ID5_ORIG =  1107
S1_NUM2_ID3_ORIG = 1113
S1_SQ2 = CGCAACC
S1_SQLEN2 = 7
S1_SQ = AGCGCAACCCC
S1_SQLEN = 11
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  1062
S2_NAME_ID3 = 1070
S2_NUM_ID5_ORIG =  1062
S2_NUM_ID3_ORIG = 1070
S2_NAME2_ID5 =  1064
S2_NAME2_ID3 = 1068
S2_NUM2_ID5_ORIG =  1064
S2_NUM2_ID3_ORIG = 1068
S2_SQ2 = GUCAG
S2_SQLEN2 = 5
S2_SQ = UCGUCAGCU
S2_SQLEN = 9
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  1185
S3_NAME_ID3 = 1194
S3_NUM_ID5_ORIG =  1185
S3_NUM_ID3_ORIG = 1194
S3_NAME2_ID5 =  1187
S3_NAME2_ID3 = 1192
S3_NUM2_ID5_ORIG =  1187
S3_NUM2_ID3_ORIG = 1192
S3_SQ2 = GACGAC
S3_SQLEN2 = 6
S3_SQ = GGGACGACGU
S3_SQLEN = 10
S3_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 9
H1_INID2 = 3
H1_OUTID2 = 7
H1_INID2_ORIG = 1107
H1_OUTID2_ORIG = 1068
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 183.23250713517146
H1_P_Y = 140.20748874596651
H1_P_Z = -6.532858741425189
# Orientation:
H1_DX_X = 0.2573166011984256
H1_DX_Y = -0.7912096362370846
H1_DX_Z = 0.5547751601083597
H1_DY_X = -0.339383375072714
H1_DY_Y = 0.4635396976186428
H1_DY_Z = 0.8185046569543033
H1_DZ_X = -0.9047690818501337
H1_DZ_Y = -0.39889630263664344
H1_DZ_Z = -0.14924693722442228
## Properties of helix 2
H2_INID = 1
H2_OUTID = 11
H2_INID2 = 3
H2_OUTID2 = 9
H2_INID2_ORIG = 1187
H2_OUTID2_ORIG = 1113
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 213.96906011641977
H2_P_Y = 154.2208830961414
H2_P_Z = -0.5206173173918585
# Orientation:
H2_DX_X = 0.5667288220423927
H2_DX_Y = -0.4560472104963935
H2_DX_Z = 0.6861773707030216
H2_DY_X = 0.6019778229021711
H2_DY_Y = -0.3394306947363077
H2_DY_Z = -0.7227790147789188
H2_DZ_X = 0.5625310151453107
H2_DZ_Y = 0.8226832593831546
H2_DZ_Z = 0.08216514912228817
## Properties of helix 3
H3_INID = 1
H3_OUTID = 10
H3_INID2 = 3
H3_OUTID2 = 8
H3_INID2_ORIG = 1064
H3_OUTID2_ORIG = 1192
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 200.6464631966474
H3_P_Y = 124.2899964653176
H3_P_Z = 5.469901180652148
# Orientation:
H3_DX_X = -0.571278115256888
H3_DX_Y = -0.29773774621662596
H3_DX_Z = -0.7648487102077013
H3_DY_X = 0.7998253088490799
H3_DY_Y = -0.4110642939579776
H3_DY_Z = -0.43738498094615963
H3_DZ_X = -0.1841759765902964
H3_DZ_Y = -0.861613823421294
H3_DZ_Z = 0.47297021992546995
#############  END of Description of junction: j28