#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 3HS2HS4HS1
FINGERPRINT = 38:64:73:80:109:109:116:118:126:171
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  105
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  105
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  107
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  107
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = GGACGG
S1_SQLEN2 = 6
S1_SQ = GCGGACGGGU
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 62
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 62
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 60
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 60
S2_SQ2 = CAA
S2_SQLEN2 = 3
S2_SQ = UGCAAGU
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AG
S3_SQLEN2 = 2
S3_SQ = ACAGGG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 340
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 340
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 338
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 338
S4_SQ2 = CA
S4_SQLEN2 = 2
S4_SQ = CCCACU
S4_SQLEN = 6
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  349
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  349
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  351
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  351
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GCAG
S5_SQLEN2 = 4
S5_SQ = AGGCAGCA
S5_SQLEN = 8
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 107
H1_OUTID2_ORIG = 60
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 115.37709578175934
H1_P_Y = 44.32835329233085
H1_P_Z = 8.54681820597528
# Orientation:
H1_DX_X = -0.11714302544223187
H1_DX_Y = 0.8045275912001557
H1_DX_Z = 0.582248114284555
H1_DY_X = -0.9425050396841925
H1_DY_Y = 0.09471039431017658
H1_DY_Z = -0.32049054803456123
H1_DZ_X = -0.31298843710291635
H1_DZ_Y = -0.5863150144822242
H1_DZ_Z = 0.7471766471408099
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 130.9801509927954
H2_P_Y = 70.45491293280163
H2_P_Z = -0.9065160432690713
# Orientation:
H2_DX_X = 0.8425537341834968
H2_DX_Y = -0.42549047506696525
H2_DX_Z = 0.3302439411112996
H2_DY_X = 0.3375144172516116
H2_DY_Y = -0.060738160772842775
H2_DY_Z = -0.939358767443641
H2_DZ_X = 0.419746617807391
H2_DZ_Y = 0.9029223285827044
H2_DZ_Z = 0.09243400557173587
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 133.54945125211296
H3_P_Y = 50.01845303888195
H3_P_Z = -8.084608639420274
# Orientation:
H3_DX_X = 0.6056667969262151
H3_DX_Y = 0.4661061007577061
H3_DX_Z = -0.6449130437024575
H3_DY_X = -0.2406961486898922
H3_DY_Y = -0.6651932749959357
H3_DY_Z = -0.7068120477935107
H3_DZ_X = -0.7584412271936287
H3_DZ_Y = 0.5833206748750186
H3_DZ_Z = -0.29069553687041605
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 351
H4_OUTID2_ORIG = 338
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 144.7999470938595
H4_P_Y = 37.94975390159588
H4_P_Z = -3.5714712916715032
# Orientation:
H4_DX_X = 0.43881751544392955
H4_DX_Y = 0.6719397220470142
H4_DX_Z = 0.5966038870766743
H4_DY_X = -0.6250208189288458
H4_DY_Y = -0.2487733268759058
H4_DY_Z = 0.7399059451988657
H4_DZ_X = 0.645591328973012
H4_DZ_Y = -0.6975735386111452
H4_DZ_Z = 0.31081022213622944
## Properties of helix 5
H5_INID = 1
H5_OUTID = 8
H5_INID2 = 3
H5_OUTID2 = 6
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 142.08311309927922
H5_P_Y = 55.60815545565656
H5_P_Z = 10.00927682301159
# Orientation:
H5_DX_X = -0.37868569574288813
H5_DX_Y = 0.5589515797472089
H5_DX_Z = 0.7376789785115463
H5_DY_X = 0.2762733848541359
H5_DY_Y = -0.6924320318417188
H5_DY_Z = 0.6664914838921749
H5_DZ_X = 0.8833290217472722
H5_DZ_Y = 0.4561918596135328
H5_DZ_Z = 0.10779066082630706
#############  END of Description of junction: j1