############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 133 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 370 S1_NAME_ID3 = 378 S1_NUM_ID5_ORIG = 370 S1_NUM_ID3_ORIG = 378 S1_NAME2_ID5 = 372 S1_NAME2_ID3 = 376 S1_NUM2_ID5_ORIG = 372 S1_NUM2_ID3_ORIG = 376 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = CGCAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 385 S2_NAME_ID3 = 391 S2_NUM_ID5_ORIG = 385 S2_NUM_ID3_ORIG = 391 S2_NAME2_ID5 = 387 S2_NAME2_ID3 = 389 S2_NUM2_ID5_ORIG = 387 S2_NUM2_ID3_ORIG = 389 S2_SQ2 = UGA S2_SQLEN2 = 3 S2_SQ = CCUGACG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 372 H1_OUTID2_ORIG = 389 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 133.49633756800864 H1_P_Y = 64.83716447365909 H1_P_Z = 18.512348699554636 # Orientation: H1_DX_X = -0.8235854546822452 H1_DX_Y = 0.5428129921479297 H1_DX_Z = 0.16450244494005872 H1_DY_X = 0.0932039972596499 H1_DY_Y = -0.1565680178310629 H1_DY_Z = 0.9832596151003408 H1_DZ_X = 0.5594819154634649 H1_DZ_Y = 0.8251306026004954 H1_DZ_Z = 0.0783548015214457 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 387 H2_OUTID2_ORIG = 376 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.23843401902094 H2_P_Y = 59.62680756134784 H2_P_Z = 16.327719008441722 # Orientation: H2_DX_X = 0.4274426158623328 H2_DX_Y = -0.08161041828081039 H2_DX_Z = -0.900351347959667 H2_DY_X = 0.12643619960816466 H2_DY_Y = -0.9807324297632576 H2_DY_Z = 0.14892208915840044 H2_DZ_X = -0.8951573591125879 H2_DZ_Y = -0.1774926500976548 H2_DZ_Z = -0.4088883241031738 ############# END of Description of junction: j9