############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 19:65:74:99:109:172 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 124.12879869236805 H1_P_Y = 77.03462410560098 H1_P_Z = -18.24409798383033 # Orientation: H1_DX_X = 0.3152759648471175 H1_DX_Y = 0.3824801611603874 H1_DX_Z = 0.8685102142798513 H1_DY_X = -0.20468826388921002 H1_DY_Y = 0.9210501346786941 H1_DY_Z = -0.33131459979057 H1_DZ_X = -0.9266627113549646 H1_DZ_Y = -0.07331831781408482 H1_DZ_Z = 0.36867417004337 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 123.50937106874743 H2_P_Y = 60.68549548535033 H2_P_Z = -38.98580592493124 # Orientation: H2_DX_X = -0.12931295349955008 H2_DX_Y = 0.9843885143227311 H2_DX_Z = -0.1194044091594435 H2_DY_X = -0.636700913607271 H2_DY_Y = -0.17474044395598298 H2_DY_Z = -0.7510510793932283 H2_DZ_X = -0.7601908356912048 H2_DZ_Y = -0.0210957369048117 H2_DZ_Z = 0.649357269317548 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.0074797729345 H3_P_Y = 78.47677628039057 H3_P_Z = 0.10339389905725405 # Orientation: H3_DX_X = -0.4188671824761343 H3_DX_Y = 0.36234414875551124 H3_DX_Z = -0.8326205626257148 H3_DY_X = -0.8328946506934187 H3_DY_Y = 0.21194393562483071 H3_DY_Z = 0.5112399329064106 H3_DZ_X = 0.36171367722386094 H3_DZ_Y = 0.9076268429340928 H3_DZ_Z = 0.21301814405044572 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 127.5249578840038 H4_P_Y = 63.337146077141455 H4_P_Z = -2.296615975756037 # Orientation: H4_DX_X = 0.7056062038522413 H4_DX_Y = -0.2654283456944597 H4_DX_Z = -0.6570142147527127 H4_DY_X = 0.5713426574319129 H4_DY_Y = -0.33534326414439874 H4_DY_Z = 0.7490744041759723 H4_DZ_X = -0.41915087126693606 H4_DZ_Y = -0.9039317941608687 H4_DZ_Z = -0.08496975121351014 ############# END of Description of junction: j4