############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 3HS6HS2 FINGERPRINT = 61:65:108:116:125:172 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 242 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 242 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 240 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 240 S1_SQ2 = UC S1_SQLEN2 = 2 S1_SQ = CGUCCC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 284 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 284 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 286 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 286 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = GUAG S3_SQLEN2 = 4 S3_SQ = GGGUAGCC S3_SQLEN = 8 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 124.12879869236805 H1_P_Y = 77.03462410560098 H1_P_Z = -18.24409798383033 # Orientation: H1_DX_X = 0.3152759648471175 H1_DX_Y = 0.3824801611603874 H1_DX_Z = 0.8685102142798513 H1_DY_X = -0.20468826388921002 H1_DY_Y = 0.9210501346786941 H1_DY_Z = -0.33131459979057 H1_DZ_X = -0.9266627113549646 H1_DZ_Y = -0.07331831781408482 H1_DZ_Z = 0.36867417004337 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 286 H2_OUTID2_ORIG = 240 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 142.44642582542522 H2_P_Y = 79.63326887317037 H2_P_Z = -26.952769551615688 # Orientation: H2_DX_X = 0.8951165981113718 H2_DX_Y = 0.24770035963008752 H2_DX_Z = 0.3706896378705906 H2_DY_X = 0.42830604674944084 H2_DY_Y = -0.7086029086157168 H2_DY_Z = -0.5607457964347375 H2_DZ_X = 0.12377482015085661 H2_DZ_Y = 0.6607014830772471 H2_DZ_Z = -0.7403737867835005 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 134.98745002365095 H3_P_Y = 78.50998918993278 H3_P_Z = -0.01065038854002509 # Orientation: H3_DX_X = -0.4173433097384418 H3_DX_Y = 0.3662592673748435 H3_DX_Z = -0.8316722376505143 H3_DY_X = -0.8359232853862011 H3_DY_Y = 0.2042492624705119 H3_DY_Z = 0.50942565672471 H3_DZ_X = 0.3564503089712616 H3_DZ_Y = 0.9078195789044798 H3_DZ_Z = 0.2209225868760309 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 127.57392706372494 H4_P_Y = 63.35893665148868 H4_P_Z = -2.5128526743458277 # Orientation: H4_DX_X = 0.7076720968952088 H4_DX_Y = -0.25541042816739434 H4_DX_Z = -0.6587607429555074 H4_DY_X = 0.567174854817722 H4_DY_Y = -0.3506325706181386 H4_DY_Z = 0.7452311617774672 H4_DZ_X = -0.4213227828380752 H4_DZ_Y = -0.9010118276721215 H4_DZ_Z = -0.10327051397433218 ############# END of Description of junction: j4