############# Start of Description of junction: j11 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 146 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 115.91727340057567 H1_P_Y = 100.40218041409122 H1_P_Z = -18.990505850295573 # Orientation: H1_DX_X = 0.12721476430118628 H1_DX_Y = 0.9611335414507494 H1_DX_Z = 0.24502799685368615 H1_DY_X = -0.9813781284294834 H1_DY_Y = 0.08612246971404147 H1_DY_Z = 0.1716970857370157 H1_DZ_X = 0.1439214118330625 H1_DZ_Y = -0.2623075212583359 H1_DZ_Z = 0.9541914857654525 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 122.4185302317673 H2_P_Y = 111.46298561308738 H2_P_Z = -39.09180945769048 # Orientation: H2_DX_X = 0.2011321753199411 H2_DX_Y = -0.9794445532546945 H2_DX_Z = -0.015304089348425975 H2_DY_X = -0.8853126021263478 H2_DY_Y = -0.17507080538410946 H2_DY_Z = -0.4307804656880734 H2_DZ_X = 0.4192462815188094 H2_DZ_Y = 0.1001927153134119 H2_DZ_Z = -0.9023269780023071 ############# END of Description of junction: j11