############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 19:65:73:100:109:173 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 124.66782001200923 H1_P_Y = 77.56786371489761 H1_P_Z = -17.638375940324455 # Orientation: H1_DX_X = 0.31748417471331436 H1_DX_Y = 0.37608151605085993 H1_DX_Z = 0.8704978415202973 H1_DY_X = -0.18067764766331607 H1_DY_Y = 0.925165272640939 H1_DY_Z = -0.33380354392078715 H1_DZ_X = -0.9308917157443375 H1_DZ_Y = -0.051302159643810796 H1_DZ_Z = 0.36167485670755184 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 124.54848797297338 H2_P_Y = 60.94566077757824 H2_P_Z = -38.26245411122913 # Orientation: H2_DX_X = -0.1295883434645333 H2_DX_Y = 0.982680778792691 H2_DX_Z = -0.13245885485505937 H2_DY_X = -0.6298249858261187 H2_DY_Y = -0.1847506718255687 H2_DY_Z = -0.7544452773323655 H2_DZ_X = -0.7658507351091544 H2_DZ_Y = -0.014341417342514262 H2_DZ_Z = 0.6428584410905529 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.30947062897565 H3_P_Y = 79.07142101944699 H3_P_Z = 0.7723701147588411 # Orientation: H3_DX_X = -0.40966999057650355 H3_DX_Y = 0.34960849296852814 H3_DX_Z = -0.8425819844177377 H3_DY_X = -0.8341155284275885 H3_DY_Y = 0.23041539842910197 H3_DY_Z = 0.5011586868475288 H3_DZ_X = 0.36935319689564494 H3_DZ_Y = 0.908120391694311 H3_DZ_Z = 0.19721959875208483 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 127.78056125637404 H4_P_Y = 64.10744447147907 H4_P_Z = -1.5248581327784496 # Orientation: H4_DX_X = 0.7007844861632151 H4_DX_Y = -0.2737365717861735 H4_DX_Z = -0.6587635336140938 H4_DY_X = 0.5686684960087831 H4_DY_Y = -0.3431960832782579 H4_DY_Z = 0.7475510618476635 H4_DZ_X = -0.4307171294481975 H4_DZ_Y = -0.8984902546434341 H4_DZ_Z = -0.08484112629314255 ############# END of Description of junction: j4