#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 9:52:59:81:93:99:100:108:139:147
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = CUGGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 548
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 548
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 547
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 547
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = GCGAG
S5_SQLEN = 5
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 145.39894376614447
H1_P_Y = 84.32131270254402
H1_P_Z = 25.58739485897069
# Orientation:
H1_DX_X = -0.058751317208503906
H1_DX_Y = -0.38644395713251356
H1_DX_Z = 0.9204397594204785
H1_DY_X = -0.889908660149672
H1_DY_Y = 0.4380677474222239
H1_DY_Z = 0.12711894138578828
H1_DZ_X = -0.45233931878280487
H1_DZ_Y = -0.8116389078058006
H1_DZ_Z = -0.3696368813023412
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 155.49065150199283
H2_P_Y = 98.53053942820223
H2_P_Z = 49.14392188337026
# Orientation:
H2_DX_X = -0.7261703352262145
H2_DX_Y = 0.23034080576290705
H2_DX_Z = -0.6477806399067063
H2_DY_X = -0.4298167473687897
H2_DY_Y = 0.5832779182446473
H2_DY_Z = 0.6892346724951679
H2_DZ_X = 0.5365950129462362
H2_DZ_Y = 0.7789287408285048
H2_DZ_Z = -0.32455478550244266
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 136.71527365982544
H3_P_Y = 85.61609552878409
H3_P_Z = 47.25129030428242
# Orientation:
H3_DX_X = 0.7540384686615482
H3_DX_Y = -0.3394346768754417
H3_DX_Z = -0.5623256066666542
H3_DY_X = 0.37414079847803805
H3_DY_Y = -0.48169279342583593
H3_DY_Z = 0.7924586523446067
H3_DZ_X = -0.5398561388858809
H3_DZ_Y = -0.8079332601744369
H3_DZ_Z = -0.23621853528280923
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 164.48441755022924
H4_P_Y = 96.38070039094016
H4_P_Z = 28.3643669290777
# Orientation:
H4_DX_X = -0.28435341334287045
H4_DX_Y = -0.8581337987902344
H4_DX_Z = -0.42749212822469573
H4_DY_X = -0.2546346521396856
H4_DY_Y = 0.4974841696106722
H4_DY_Z = -0.82925912410807
H4_DZ_X = 0.9242858487772878
H4_DZ_Y = -0.12694835312289854
H4_DZ_Z = -0.35997192305710257
## Properties of helix 5
H5_INID = 1
H5_OUTID = 5
H5_INID2 = 2
H5_OUTID2 = 4
H5_INID2_ORIG = 37
H5_OUTID2_ORIG = 547
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 154.68117590705407
H5_P_Y = 82.21901384231427
H5_P_Z = 20.09932734952808
# Orientation:
H5_DX_X = -0.15410044764144004
H5_DX_Y = 0.8472804115512531
H5_DX_Z = 0.5083000651566714
H5_DY_X = 0.9836929880361254
H5_DY_Y = 0.17984898971280927
H5_DY_Z = -0.0015640293545367001
H5_DZ_X = -0.09274242462456073
H5_DZ_Y = 0.49977019228926167
H5_DZ_Z = -0.8611786095659291
#############  END of Description of junction: j9