RNAJunction Database - Junction Profile:10438
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10438: 2E5L_j2_A-A448_A-U480

Primary Citation: (from PDB entry 2E5L)

T.KAMINISHI D.N.WILSON C.TAKEMOTO J.M.HARMS M.KAWAZOE F.SCHLUENZEN K.HANAWA-SUETSUGU M.SHIROUZU P.FUCINI S.YOKOYAMA RIKEN STRUCTURAL GENOMICS/PROTEO A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE-DALGARNO INTERACTION STRUCTURE V. 15 289 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1PNS j2 A-A448 A-U480 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 137°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.27348Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACUGACGGUAC 11nt

Strand 2: Chain A: GGACGAAAC 9nt

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