RNAJunction Database - Junction Profile:10448
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10448: 2E5L_j2_A-C54_A-A356

Primary Citation: (from PDB entry 2E5L)

T.KAMINISHI D.N.WILSON C.TAKEMOTO J.M.HARMS M.KAWAZOE F.SCHLUENZEN K.HANAWA-SUETSUGU M.SHIROUZU P.FUCINI S.YOKOYAMA RIKEN STRUCTURAL GENOMICS/PROTEO A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE-DALGARNO INTERACTION STRUCTURE V. 15 289 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1VOZ j2 A-C54 A-A356 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 177°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.89964Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GACAUGC 7nt

Strand 2: Chain A: GCAGUU 6nt

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