RNAJunction Database - Junction Profile:10478

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10478: 2E5L_j3_A-A937_A-U1345_A-A1374

Primary Citation: (from PDB entry 2E5L)

T.KAMINISHI D.N.WILSON C.TAKEMOTO J.M.HARMS M.KAWAZOE F.SCHLUENZEN K.HANAWA-SUETSUGU M.SHIROUZU P.FUCINI S.YOKOYAMA RIKEN STRUCTURAL GENOMICS/PROTEO A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE-DALGARNO INTERACTION STRUCTURE V. 15 289 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1XNQ j3 A-A937 A-U1345 A-A1374 
NC-IUBMB Classification:Cluster Page
Angles: 51:112:157°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.703Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCUAGUAA 8nt

Strand 2: Chain A: ACAAGC 6nt

Strand 3: Chain A: UGAAUACGU 9nt

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