RNAJunction Database - Junction Profile:10630
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10630: 2GDI_j2_Y-U59_Y-G76

Primary Citation: (from PDB entry 2GDI)

A.SERGANOV STRUCTURAL BASIS FOR GENE REGULATION BY A THIAMINE PYROPHOSPHATE-SENSING RIBOSWITCH. NATURE V. 441 1167 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2HOL j2 A-U59 A-G76 
NC-IUBMB Classification:HS3HS3Cluster Page
Angles: 157°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.46813Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain Y: CCUGAUCUG 9nt

Strand 2: Chain Y: CAGCGUAGG 9nt

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