RNAJunction Database - Junction Profile:11422

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11422: 2HHH_j2_A-A407_A-G424

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2E5L j2 A-A411 A-G428 
NC-IUBMB Classification:HS1HS3Cluster Page
Angles: 114°
Fit Criteria: C
Extracted Structure:Download

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAAGAAG 7nt

Strand 2: Chain A: UGUAA 5nt

Valid XHTML 1.0 Transitional