RNAJunction Database - Junction Profile:11429
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11429: 2HHH_j2_A-C1386_A-G1475

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1XNQ j2 A-C1403 A-G1497 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 152°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.07205Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UCGUAAC 7nt

Strand 2: Chain A: GCCCGU 6nt

Valid XHTML 1.0 Transitional