RNAJunction Database - Junction Profile:11447
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11447: 2HHH_j2_A-G499_A-G513

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2I2U j2 A-G515 A-G529 
NC-IUBMB Classification:HS4HS6Cluster Page
Angles: 40°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.98825Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGGUAAUACGG 12nt

Strand 2: Chain A: CCGUGCCAGC 10nt

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