RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11488: 2HHH_j5_A-C59_A-G101_A-A311_A-C333_A-G347

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images

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Derived Information

Type:	5-way	Cluster:	1IBM j5 A-C58 A-G107 A-A315 A-C337 A-G351
NC-IUBMB Classification:			Cluster Page
Angles:	36:66:71:82:106:108:117:118:127:172°
Fit Criteria:	A
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.85986Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGGACGGGU 10nt

Strand 2: Chain A: UGCAAGU 7nt

Strand 3: Chain A: ACAGGG 6nt

Strand 4: Chain A: CCCACU 6nt

Strand 5: Chain A: AGGCAGCA 8nt