RNAJunction Database - Junction Profile:11589
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11589: 2I2P_j4_A-U1116_A-A1155_A-A1176_A-G1181

Primary Citation: (from PDB entry 2I2P)

V.BERK W.ZHANG R.D.PAI J.H.D.CATE STRUCTURAL BASIS FOR MRNA AND TRNA POSITIONING ON THE RIBOSOME. PROC.NATL.ACAD.SCI.USA V. 103 15830 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2I2U j4 A-U1116 A-A1155 A-A1176 A-G1181 
NC-IUBMB Classification:Cluster Page
Angles: 22:65:134:147:147:148°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.92694Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAGACUGC 8nt

Strand 2: Chain A: UUAUC 5nt

Strand 3: Chain A: GAGG 4nt

Strand 4: Chain A: AGGUGG 6nt

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