RNAJunction Database - Junction Profile:1171
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1171: 1I9F_j2_A-G10_A-G22

Primary Citation: (from PDB entry 1I9F)

Q.ZHANG K.HARADA H.S.CHO A.FRANKEL D.E.WEMMER STRUCTURAL CHARACTERIZATION OF THE COMPLEX OF THE REV RESPONSE ELEMENT RNA WITH A SELECTED PEPTIDE CHEM.BIOL. V. 8 511 2001

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1CSL j2 A-G50 B-G67 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 164°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.983Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUGACGG 7nt

Strand 2: Chain A: GCGCAG 6nt

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