RNAJunction Database - Junction Profile:1173
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1173: 1I9V_j4_A-U7_A-C25_A-A44_A-G65

Primary Citation: (from PDB entry 1I9V)

N.E.MIKKELSEN K.JOHANSSON A.VIRTANEN L.A.KIRSEBOM AMINOGLYCOSIDE BINDING DISPLACES A DIVALENT METAL ION IN A TRNA-NEOMYCIN B COMPLEX NAT.STRUCT.BIOL. V. 8 510 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2GY9 j4 V-U7 V-C25 V-A44 V-G65 
NC-IUBMB Classification:Cluster Page
Angles: 73:89:96:102:162:172°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.04982Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGC 4nt

Strand 2: Chain A: UUUAGC 6nt

Strand 3: Chain A: GAGGUCCU 8nt

Strand 4: Chain A: AGAA 4nt

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