RNAJunction Database - Junction Profile:1174
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1174: 1I9X_j2_A-U4_B-U9

Primary Citation: (from PDB entry 1I9X)

J.A.BERGLUND M.ROSBASH S.C.SCHULTZ CRYSTAL STRUCTURE OF A MODEL BRANCHPOINT-U2 SNRNA DUPLEX CONTAINING BULGED ADENOSINES RNA V. 7 682 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1I9X j2 A-U9 B-U4 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 175°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.63212Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACUAACG 7nt

Strand 2: Chain B: CGUAGU 6nt

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