RNAJunction Database - Junction Profile:1180
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1180: 1IBK_j2_A-A448_A-U480

Primary Citation: (from PDB entry 1IBK)

J.M.OGLE D.E.BRODERSEN W.M.CLEMONS JR. M.J.TARRY A.P.CARTER V.RAMAKRISHNAN RECOGNITION OF COGNATE TRANSFER RNA BY THE 30S RIBOSOMAL SUBUNIT SCIENCE V. 292 897 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1PNS j2 A-A448 A-U480 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 138°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.07856Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACUGACGGUAC 11nt

Strand 2: Chain A: GGACGAAAC 9nt

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