RNAJunction Database - Junction Profile:12000

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12000: 2J02_j2_A-G410_A-G428

Primary Citation: (from PDB entry 2J02)

M.SELMER C.M.DUNHAM F.V.MURPHY A.WEIXLBAUMER S.PETRY J.R.WEIR A.C.KELLEY V.RAMAKRISHNAN STRUCTURE OF THE 70S RIBOSOME COMPLEXED WITH MRNA AND TRNA. SCIENCE V. 313 1935 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1HNX j2 A-G410 A-G428 
NC-IUBMB Classification:HS3HS4Cluster Page
Angles: 127°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.67592Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGGAAGAAGC 10nt

Strand 2: Chain A: GUGUAAACU 9nt

Valid XHTML 1.0 Transitional