RNAJunction Database - Junction Profile:12172

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12172: 2J28_j2_B-C275_B-G359

Primary Citation: (from PDB entry 2J28)

M.HALIC M.BLAU T.BECKER T.MIELKE M.R.POOL K.WILD I.SINNING R.BECKMANN JRNL REMARK DBREF FOLLOWING THE SIGNAL SEQUENCE FROM RIBOSOMAL TUNNEL EXIT TO SIGNAL RECOGNITION PARTICLE NATURE V. 444 508 2006

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2AWB j2 B-C275 B-G359 
NC-IUBMB Classification:HS2HS5Cluster Page
Angles: 112°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.98105Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GCCUGAAUCAG 11nt

Strand 2: Chain B: CUGUGAGC 8nt

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