RNAJunction Database - Junction Profile:12179

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12179: 2J28_j2_B-G674_B-A800

Primary Citation: (from PDB entry 2J28)

M.HALIC M.BLAU T.BECKER T.MIELKE M.R.POOL K.WILD I.SINNING R.BECKMANN JRNL REMARK DBREF FOLLOWING THE SIGNAL SEQUENCE FROM RIBOSOMAL TUNNEL EXIT TO SIGNAL RECOGNITION PARTICLE NATURE V. 444 508 2006

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2AW4 j2 B-G674 B-A800 
NC-IUBMB Classification:HS2HS5Cluster Page
Angles: 169°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.84961Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GGAGAUAGCUG 11nt

Strand 2: Chain B: CCGAAACC 8nt

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