RNAJunction Database - Junction Profile:12211
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12211: 2LDZ_j2_A-C6_A-G23

Primary Citation: (from PDB entry 2LDZ)

C.G.HOOGSTRATEN P.LEGAULT A.PARDI NMR SOLUTION STRUCTURE OF THE LEAD-DEPENDENT RIBOZYME: EVIDENCE FOR DYNAMICS IN RNA CATALYSIS J.MOL.BIOL. V. 284 337 1998

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NUJ j2 C-C23 D-G43 
NC-IUBMB Classification:HS1HS3Cluster Page
Angles: 134°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.05466Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACCGAGCCA 9nt

Strand 2: Chain A: UGGGAGU 7nt

Valid XHTML 1.0 Transitional