RNAJunction Database - Junction Profile:12455
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12455: 2OTJ_j5_0-C1889_0-C1946_0-C1965_0-G1970_0-A2010

Primary Citation: (from PDB entry 2OTJ)

G.BLAHA S.J.SCHROEDER J.TIRADO-RIVES THE STRUCTURES OF ANTIBIOTICS BOUND TO THE E SITE REGION OF THE 50 S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI: 13-DEOXYTEDANOLIDE AND GIRODAZOLE. J.MOL.BIOL. V. 367 1471 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1VQL j5 0-C1889 0-C1946 0-C1965 0-G1970 0-A2010 
NC-IUBMB Classification:Cluster Page
Angles: 19:22:46:62:126:148:148:156:163:170°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.86734Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCGG 4nt

Strand 2: Chain 0: CCUGC 5nt

Strand 3: Chain 0: UCUU 4nt

Strand 4: Chain 0: AGGUA 5nt

Strand 5: Chain 0: GAAUGG 6nt

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